RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 MSRAQ9UJ68 235 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 MTUS1Q9ULD2 1270 aa8.06□□□□□ -1.12
PRPF40B-214ENST00000551320 TNKSO95271 1327 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 TTC41PQ6P2S7 1318 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 TMEM265A0A087WTH1 108 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 TNFRSF10AO00220 468 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 ERC2O15083 957 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 ACTN4O43707 911 aaKnown RBP8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 ICAM1P05362 532 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 SLC3A2P08195 630 aaKnown RBP8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 FDX1P10109 184 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 HSPD1P10809 573 aaKnown RBP8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 ATP2A2P16615 1042 aaKnown RBP8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 PDE1AP54750 535 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 RPS6P62753 249 aaKnown RBP8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 IQSEC1Q6DN90 963 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 PSRC1Q6PGN9 363 aaPredicted RBP8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 ARNTL2Q8WYA1 636 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 WNT8BQ93098 351 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 ASB2Q96Q27 587 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 PRR14Q9BWN1 585 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 OSBPL7Q9BZF2 842 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 FTOQ9C0B1 505 aaKnown RBP eCLIP8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 IL25Q9H293 177 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 ZNF287Q9HBT7 754 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 SLC4A7Q9Y6M7 1214 aa8.05□□□□□ -1.12
PRPF40B-214ENST00000551320 MROH7Q68CQ1 1323 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 ORC4O43929 436 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 IGHDP01880 384 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 TXNP10599 105 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 PDHBP11177 359 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 TOP1P11387 765 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 RRP1P56182 461 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 NKX3-2P78367 333 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 DEFB103AP81534 67 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 ZNF543Q08ER8 600 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 GPNMBQ14956 572 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 QPCTQ16769 361 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 TUSC1Q2TAM9 212 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 PUS10Q3MIT2 529 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 DUSP28Q4G0W2 176 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 GDF6Q6KF10 455 aaPredicted RBP8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 RNF207Q6ZRF8 634 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 DCAF4Q8WV16 495 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 AFG1LQ8WV93 481 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 PIBF1Q8WXW3 757 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 DHX38Q92620 1227 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.123e-7■■■■■ 29.3
PRPF40B-214ENST00000551320 CTAGE1Q96RT6 745 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 UHRF1Q96T88 793 aaPredicted RBP8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 ALG1Q9BT22 464 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 CHMP4BQ9H444 224 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 THEGQ9P2T0 379 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 PCDHGC3Q9UN70 934 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 TELO2Q9Y4R8 837 aa8.04□□□□□ -1.12
PRPF40B-214ENST00000551320 BRWD1Q9NSI6 2320 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 TRIP12Q14669 1992 aaPredicted RBP8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 FAM86C2PA6NEL3 165 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 B4E1Z4 1266 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 ZNF286BP0CG31 522 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 EIF2AK2P19525 551 aaKnown RBP8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 NOVP48745 357 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 PPP2R5BQ15173 497 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 RAB30Q15771 203 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 SLC35G1Q2M3R5 365 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 TKFCQ3LXA3 575 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 MCMDC2Q4G0Z9 681 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 BTNL9Q6UXG8 535 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 STAG2Q8N3U4 1231 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 MORC4Q8TE76 937 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 GDPD5Q8WTR4 605 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 KAT2BQ92831 832 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 EVI5LQ96CN4 794 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 MTG1Q9BT17 334 aaPredicted RBP8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 SENP2Q9HC62 589 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 VTA1Q9NP79 307 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 ANAPC4Q9UJX5 808 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 SUPT16HQ9Y5B9 1047 aaKnown RBP8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 TAF6LQ9Y6J9 622 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 C5orf42Q9H799 3197 aa8.03□□□□□ -1.12
PRPF40B-214ENST00000551320 TRIOO75962 3097 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 RBM47A0AV96 593 aaKnown RBP8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 DHX16O60231 1041 aaKnown RBP8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 ZEB2O60315 1214 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 PLA2G6O60733 806 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 PPP1R11O60927 126 aaPredicted RBP8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 CSPG5O95196 566 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 FGRP09769 529 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 IQCF3P0C7M6 154 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 BMP1P13497 986 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 HOXA13P31271 388 aaPredicted RBP8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 PTPN5P54829 565 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 MRPS5P82675 430 aaKnown RBP8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 TAP1Q03518 808 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 ALX1Q15699 326 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 CDC37Q16543 378 aaPredicted RBP8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 TMEM67Q5HYA8 995 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 AKNAD1Q5T1N1 836 aa8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 CWC27Q6UX04 472 aaKnown RBP8.02□□□□□ -1.13
PRPF40B-214ENST00000551320 MFSD6Q6ZSS7 791 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 946.9 ms