RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 NUGGCQ68CJ6 796 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 SPECC1LQ69YQ0 1117 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 XKR5Q6UX68 686 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 NFXL1Q6ZNB6 911 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 CNTROBQ8N137 903 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 LINC00301Q8NCQ3 95 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 CCDC148Q8NFR7 591 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 B4GALNT2Q8NHY0 566 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 KLHDC4Q8TBB5 520 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 ENOX1Q8TC92 643 aaKnown RBP5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 NSMCE1Q8WV22 266 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 RUFY2Q8WXA3 655 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 ATRIPQ8WXE1 791 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 CCT6BQ92526 530 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 TNFRSF25Q93038 417 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 BHMTQ93088 406 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 RBM17Q96I25 401 aaKnown RBP5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 MED15Q96RN5 788 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 FAM129BQ96TA1 746 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 GGA1Q9UJY5 639 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 ZNF510Q9Y2H8 683 aa5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 RBM8AQ9Y5S9 174 aaKnown RBP5.9□□□□□ -1.46
LSM3P2-201ENST00000551246 CLTCQ00610 1675 aaKnown RBP5.9□□□□□ -1.47
LSM3P2-201ENST00000551246 UBN2Q6ZU65 1347 aa5.9□□□□□ -1.47
LSM3P2-201ENST00000551246 AGLP35573 1532 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 ARHGAP5Q13017 1502 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 NEURL1BA8MQ27 555 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 UBAP1LF5GYI3 381 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 CYP27B1O15528 508 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 SKAP2O75563 359 aaPredicted RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 ALDH1L1O75891 902 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 GLRX3O76003 335 aaKnown RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 MAP3K6O95382 1288 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 TFRCP02786 760 aaKnown RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 VIMP08670 466 aaKnown RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 ADH6P28332 368 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 MDH1P40925 334 aaKnown RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 SARSP49591 514 aaKnown RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 INHBCP55103 352 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 DEUP1Q05D60 604 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 PDCLQ13371 301 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 LAMB3Q13751 1172 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 ZNF569Q5MCW4 686 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 ZNF385CQ66K41 422 aaPredicted RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 PDE12Q6L8Q7 609 aaKnown RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 EMBQ6PCB8 327 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 LYPD4Q6UWN0 246 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 KRT25Q7Z3Z0 450 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 ARHGAP22Q7Z5H3 698 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 KIRREL3Q8IZU9 778 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 FBXL16Q8N461 479 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 TEX9Q8N6V9 391 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 NSUN7Q8NE18 718 aaKnown RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 SMCR8Q8TEV9 937 aaPredicted RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 NCSTNQ92542 709 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 STAMBPL1Q96FJ0 436 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 RBM41Q96IZ5 413 aaKnown RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 RNPC3Q96LT9 517 aaKnown RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 CCDC114Q96M63 670 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 GORASP1Q9BQQ3 440 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 DESI2Q9BSY9 194 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 STK31Q9BXU1 1019 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 RBCK1Q9BYM8 510 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 TSGA10Q9BZW7 698 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 MAF1Q9H063 256 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 ZSWIM4Q9H7M6 989 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 HAUS2Q9NVX0 235 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 HMG20BQ9P0W2 317 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 BIN2Q9UBW5 565 aaPredicted RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 SUN2Q9UH99 717 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 DCTN4Q9UJW0 460 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 GDF2Q9UK05 429 aaPredicted RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 PRR12Q9ULL5 1215 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 LRRC42Q9Y546 428 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 ITIH6Q6UXX5 1313 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 BCL9LQ86UU0 1499 aa5.89□□□□□ -1.47
LSM3P2-201ENST00000551246 XRN1Q8IZH2 1706 aaKnown RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 MYH15Q9Y2K3 1946 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 A0A1B0GVL5 298 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CFAP73A6NFT4 308 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 LRRC10BA6NIK2 292 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 ENO4A6NNW6 628 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 ADARB2-AS1A8MUL3 147 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 AKR1B15C9JRZ8 316 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 PDE2AO00408 941 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 ELL2O00472 640 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 SH2B2O14492 632 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 GPR182O15218 404 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 NDUFB5O43674 189 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 DTNBO60941 627 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 ANP32DO95626 131 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 ECEL1O95672 775 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CELA2BP08218 269 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 EPXP11678 715 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 HOXD8P13378 290 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 BMP6P22004 513 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CNGA1P29973 690 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 GBP2P32456 591 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 PSMC4P43686 418 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms