RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 MAGEA1P43355 309 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 GFPT1Q06210 699 aaPredicted RBP11.38□□□□□ -0.59
ERBB3-214ENST00000550070 ASTE1Q2TB18 679 aaPredicted RBP11.38□□□□□ -0.59
ERBB3-214ENST00000550070 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 SLC51AQ86UW1 340 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 CCDC155Q8N6L0 562 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 MTMR8Q96EF0 704 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 PNMA5Q96PV4 448 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 SPZ1Q9BXG8 430 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 TLR10Q9BXR5 811 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 ANKRD2Q9GZV1 360 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 VAT1LQ9HCJ6 419 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 C6orf50Q9HD87 102 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 TMEM260Q9NX78 707 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 SAP30BPQ9UHR5 308 aaKnown RBP11.38□□□□□ -0.59
ERBB3-214ENST00000550070 IRS2Q9Y4H2 1338 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 PJA2O43164 708 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 KCNQ2O43526 872 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 CCDC172P0C7W6 258 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 MEX3CQ5U5Q3 659 aaKnown RBP11.38□□□□□ -0.59
ERBB3-214ENST00000550070 UNC13DQ70J99 1090 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 LINC00116Q8NCU8 138 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 GLIS3Q8NEA6 775 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 RUBCNQ92622 972 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 ALS2CR12Q96Q35 445 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 LZTS2Q9BRK4 669 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 EFCC1Q9HA90 598 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 STIM2Q9P246 746 aa11.38□□□□□ -0.59
ERBB3-214ENST00000550070 MPHOSPH10O00566 681 aaKnown RBP11.37□□□□□ -0.59
ERBB3-214ENST00000550070 BUB1O43683 1085 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 LDHBP07195 334 aaKnown RBP11.37□□□□□ -0.59
ERBB3-214ENST00000550070 COL5A3P25940 1745 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-214ENST00000550070 GNA11P29992 359 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 CCT5P48643 541 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 EPHB4P54760 987 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 RASSF7Q02833 373 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 KCNMA1Q12791 1236 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 TTC31Q49AM3 519 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-214ENST00000550070 KLHDC7AQ5VTJ3 777 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 ARL8AQ96BM9 186 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 MS4A14Q96JA4 679 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 CAPS2Q9BXY5 557 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 RABEP2Q9H5N1 569 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 RBM12Q9NTZ6 932 aaKnown RBP11.37□□□□□ -0.59
ERBB3-214ENST00000550070 PVALEFA0A1B0GWK0 134 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 GOLGA8KD6RF30 607 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 SLC1A4P43007 532 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 LRRC41Q15345 812 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 TTMPQ5BVD1 217 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 ZFYVE27Q5T4F4 411 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 HGSNATQ68CP4 663 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 TTC19Q6DKK2 380 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-214ENST00000550070 PDXDC1Q6P996 788 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 LRRC55Q6ZSA7 311 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 CCDC84Q86UT8 332 aaPredicted RBP11.37□□□□□ -0.59
ERBB3-214ENST00000550070 MAPKAPK5Q8IW41 473 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 GUF1Q8N442 669 aaKnown RBP11.37□□□□□ -0.59
ERBB3-214ENST00000550070 LARP4BQ92615 738 aaKnown RBP11.37□□□□□ -0.59
ERBB3-214ENST00000550070 NLRP3Q96P20 1036 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 MTMR9Q96QG7 549 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 PIGSQ96S52 555 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 GRIN2DO15399 1336 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 EDIL3O43854 480 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 PAX3P23760 479 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 NT5C2P49902 561 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 TMC4Q7Z404 712 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 PPM1EQ8WY54 764 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 NUDT12Q9BQG2 462 aa11.37□□□□□ -0.59
ERBB3-214ENST00000550070 NAV1Q8NEY1 1877 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 SLC37A4O43826 429 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 PAFAH1B1P43034 410 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 ZC3H12AQ5D1E8 599 aaKnown RBP11.36□□□□□ -0.59
ERBB3-214ENST00000550070 C1QTNF12Q5T7M4 302 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 SOGA3Q5TF21 947 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 KCNK18Q7Z418 384 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 EFCAB13Q8IY85 973 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 PAIP2Q9BPZ3 127 aaKnown RBP11.36□□□□□ -0.59
ERBB3-214ENST00000550070 UBA5Q9GZZ9 404 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 STK17AQ9UEE5 414 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 ABCB11O95342 1321 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 ANKRD62A6NC57 917 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 POTEMA6NI47 508 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 OPA1O60313 960 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 TNFRSF8P28908 595 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 TM4SF1P30408 202 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 CDK8P49336 464 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 GNGT1P63211 74 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 LRRC63Q05C16 580 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 CALCRLQ16602 461 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 C8orf74Q6P047 294 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 MAMSTRQ6ZN01 415 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 CACNA2D4Q7Z3S7 1137 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 REXO1Q8N1G1 1221 aaKnown RBP11.36□□□□□ -0.59
ERBB3-214ENST00000550070 BCAS4Q8TDM0 211 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 KCNV2Q8TDN2 545 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 CAVIN3Q969G5 261 aa11.36□□□□□ -0.59
ERBB3-214ENST00000550070 MYCBPQ99417 103 aaPredicted RBP11.36□□□□□ -0.59
ERBB3-214ENST00000550070 KDM4CQ9H3R0 1056 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms