RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CDC25BP30305 580 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 HOXA7P31268 230 aaPredicted RBP10.46□□□□□ -0.73
GNE-206ENST00000543356 TMEM132BQ14DG7 1078 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 HAUS3Q68CZ6 603 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 SNRNP48Q6IEG0 339 aaKnown RBP10.46□□□□□ -0.73
GNE-206ENST00000543356 CNNM4Q6P4Q7 775 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 ERMNQ8TAM6 284 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 LARP4BQ92615 738 aaKnown RBP10.46□□□□□ -0.73
GNE-206ENST00000543356 RAD54LQ92698 747 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 SLC5A5Q92911 643 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 GJA10Q969M2 543 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 NUDT12Q9BQG2 462 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 TEX13BQ9BXU2 312 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 GTPBP4Q9BZE4 634 aaKnown RBP10.46□□□□□ -0.73
GNE-206ENST00000543356 LRRC27Q9C0I9 530 aa10.46□□□□□ -0.73
GNE-206ENST00000543356 MEIS1O00470 390 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 KLRC4O43908 158 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 BCRP11274 1271 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 TTLL12Q14166 644 aaPredicted RBP10.46□□□□□ -0.74
GNE-206ENST00000543356 TREML2Q5T2D2 321 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 ZNF658Q5TYW1 1059 aaPredicted RBP10.46□□□□□ -0.74
GNE-206ENST00000543356 PCNX4Q63HM2 1172 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 SLC30A10Q6XR72 485 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 RNF207Q6ZRF8 634 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 SV2BQ7L1I2 683 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 CYP2W1Q8TAV3 490 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 ENOX1Q8TC92 643 aaKnown RBP10.46□□□□□ -0.74
GNE-206ENST00000543356 OTUD5Q96G74 571 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 CLMNQ96JQ2 1002 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 MAP7D2Q96T17 732 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 TRIM9Q9C026 710 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 HOMER2Q9NSB8 354 aa10.46□□□□□ -0.74
GNE-206ENST00000543356 CCT6AP40227 531 aaKnown RBP10.45□□□□□ -0.74
GNE-206ENST00000543356 RPS6P62753 249 aaKnown RBP10.45□□□□□ -0.74
GNE-206ENST00000543356 LDLRAD1Q5T700 205 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 KCTD17Q8N5Z5 321 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 MB21D1Q8N884 522 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 MRFAP1L1Q96HT8 127 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 MXRA8Q9BRK3 442 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 TRIM5Q9C035 493 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 HSD3B7Q9H2F3 369 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 RIPK3Q9Y572 518 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 IRF6O14896 467 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 RHOBTB3O94955 611 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 UBXN2AP68543 259 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 PPP2R5CQ13362 524 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 XRRA1Q6P2D8 792 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 LBX2Q6XYB7 198 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 MOB2Q70IA6 237 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 CCDC47Q96A33 483 aaKnown RBP10.45□□□□□ -0.74
GNE-206ENST00000543356 UBIAD1Q9Y5Z9 338 aa10.45□□□□□ -0.74
GNE-206ENST00000543356 PSMD10O75832 226 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 STAT3P40763 770 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 FMR1Q06787 632 aaKnown RBP eCLIP10.44□□□□□ -0.74
GNE-206ENST00000543356 ECM1Q16610 540 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 NCAPH2Q6IBW4 605 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 GADL1Q6ZQY3 521 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 ACAD9Q9H845 621 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 PXMP2Q9NR77 195 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 AGTPBP1Q9UPW5 1226 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 SYNRGQ9UMZ2 1314 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 LCTP09848 1927 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 UTRNP46939 3433 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
GNE-206ENST00000543356 RPA1P27694 616 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 MCM6Q14566 821 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 PGM5Q15124 567 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 LRCH2Q5VUJ6 765 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 KCNK18Q7Z418 384 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 IL31RAQ8NI17 732 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 OPTNQ96CV9 577 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 TAAR1Q96RJ0 339 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 RIT2Q99578 217 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 POLR3CQ9BUI4 534 aaPredicted RBP10.44□□□□□ -0.74
GNE-206ENST00000543356 WDR11Q9BZH6 1224 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 CLEC11AQ9Y240 323 aa10.44□□□□□ -0.74
GNE-206ENST00000543356 PVALEFA0A1B0GWK0 134 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 POTEB3A0JP26 581 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 MED24O75448 989 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 ITGB5P18084 799 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 ASIC1P78348 528 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 MOGSQ13724 837 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 COBLL1Q53SF7 1204 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 POTEBQ6S5H4 581 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 NSMFQ6X4W1 530 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 OTOP1Q7RTM1 612 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 GIMAP8Q8ND71 665 aaPredicted RBP10.43□□□□□ -0.74
GNE-206ENST00000543356 CHST13Q8NET6 341 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 PDCD2LQ9BRP1 358 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 ZNF577Q9BSK1 485 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 JADE2Q9NQC1 790 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 MYMKA6NI61 221 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 GOLGA6L6A8MZA4 724 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 GAS7O60861 476 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 ARP10275 920 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 MUTP22033 750 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 PPP1R2P41236 205 aa10.43□□□□□ -0.74
GNE-206ENST00000543356 FKBP1BP68106 108 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms