RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 EPG5Q9HCE0 2579 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 PLXNA4Q9HCM2 1894 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 ZNF316A6NFI3 1004 aaPredicted RBP6.18□□□□□ -1.42
CHD4-205ENST00000536301 AMHP03971 560 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 CTSHP09668 335 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 DNAJB1P25685 340 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 CTNNB1P35222 781 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 RBM10P98175 930 aaKnown RBP6.18□□□□□ -1.42
CHD4-205ENST00000536301 CTDSPL2Q05D32 466 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 PTK7Q13308 1070 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 MFSD10Q14728 455 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 KIAA0753Q2KHM9 967 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 PLEKHG4Q58EX7 1191 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 BRDTQ58F21 947 aaPredicted RBP6.18□□□□□ -1.42
CHD4-205ENST00000536301 GIMAP6Q6P9H5 292 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 BTNL9Q6UXG8 535 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 RNF207Q6ZRF8 634 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 SUGP1Q8IWZ8 645 aaKnown RBP6.18□□□□□ -1.42
CHD4-205ENST00000536301 FTSJ3Q8IY81 847 aaKnown RBP6.18□□□□□ -1.42
CHD4-205ENST00000536301 FBXL6Q8N531 539 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 APPBP2Q92624 585 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 ATOH1Q92858 354 aaPredicted RBP6.18□□□□□ -1.42
CHD4-205ENST00000536301 TOP1MTQ969P6 601 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 MSLNLQ96KJ4 702 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 TAAR1Q96RJ0 339 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 YME1L1Q96TA2 773 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 UPF3BQ9BZI7 483 aaKnown RBP6.18□□□□□ -1.42
CHD4-205ENST00000536301 CLEC1BQ9P126 229 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 CTNNA3Q9UI47 895 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 CD207Q9UJ71 328 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 STX8Q9UNK0 236 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 SUPT16HQ9Y5B9 1047 aaKnown RBP6.18□□□□□ -1.42
CHD4-205ENST00000536301 PCDHGC5Q9Y5F6 944 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 LOXHD1Q8IVV2 1947 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 RAD50Q92878 1312 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 WDR87Q6ZQQ6 2873 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 KAT6AQ92794 2004 aa6.18□□□□□ -1.42
CHD4-205ENST00000536301 PRR23AA6NEV1 266 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 RSPH10B2B2RC85 870 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 LOC730098B7Z3J9 87 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 EFCAB14O75071 495 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 GLP2RO95838 553 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 F2P00734 622 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 GH1P01241 217 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 APPP05067 770 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 RSPH10BP0C881 870 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 AVPR2P30518 371 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 THPOP40225 353 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 NOVP48745 357 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 RRP1P56182 461 aaKnown RBP6.17□□□□□ -1.42
CHD4-205ENST00000536301 PPARAQ07869 468 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 ADAM15Q13444 863 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 HSP90AB4PQ58FF6 505 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 KBTBD3Q8NAB2 608 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 GPKOWQ92917 476 aaPredicted RBP eCLIP6.17□□□□□ -1.424e-6■□□□□ 10.4
CHD4-205ENST00000536301 ZFP91Q96JP5 570 aaPredicted RBP6.17□□□□□ -1.42
CHD4-205ENST00000536301 SAMD11Q96NU1 681 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 BCAS3Q9H6U6 928 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 RC3H2Q9HBD1 1191 aaKnown RBP6.17□□□□□ -1.42
CHD4-205ENST00000536301 BARX2Q9UMQ3 279 aaPredicted RBP6.17□□□□□ -1.42
CHD4-205ENST00000536301 FAM50BQ9Y247 325 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 TELO2Q9Y4R8 837 aa6.17□□□□□ -1.42
CHD4-205ENST00000536301 BAZ2BQ9UIF8 2168 aaKnown RBP6.17□□□□□ -1.42
CHD4-205ENST00000536301 LOC102724159A0A0B4J2E5 919 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 MED19A0JLT2 244 aaPredicted RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 PATL2C9JE40 543 aaKnown RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 RNF113AO15541 343 aaKnown RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 TREHO43280 583 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 KRT37O76014 449 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 PARNO95453 639 aaKnown RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 EYA4O95677 639 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 CASTP20810 708 aaKnown RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 BMPR1AP36894 532 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 NDUFV1P49821 464 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 CBX2Q14781 532 aaPredicted RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 PWP2Q15269 919 aaKnown RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 USH1GQ495M9 461 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 ZSCAN25Q6NSZ9 544 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 SERINC5Q86VE9 423 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 C7orf31Q8N865 590 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 DNERQ8NFT8 737 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 VN1R2Q8NFZ6 395 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 SYTL5Q8TDW5 730 aaPredicted RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 DCAF4Q8WV16 495 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 RPGRIP1Q96KN7 1286 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 POP1Q99575 1024 aaKnown RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 TMEM47Q9BQJ4 181 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 FSD1Q9BTV5 496 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 IFIH1Q9BYX4 1025 aaKnown RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 SMOC2Q9H3U7 446 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 CDH22Q9UJ99 828 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 DDX41Q9UJV9 622 aaKnown RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 USP15Q9Y4E8 981 aaPredicted RBP6.16□□□□□ -1.42
CHD4-205ENST00000536301 GPR179Q6PRD1 2367 aa6.16□□□□□ -1.42
CHD4-205ENST00000536301 OTOGLQ3ZCN5 2332 aa6.15□□□□□ -1.42
CHD4-205ENST00000536301 ACACBO00763 2458 aa6.15□□□□□ -1.42
CHD4-205ENST00000536301 MAP1BP46821 2468 aaKnown RBP6.15□□□□□ -1.42
CHD4-205ENST00000536301 TSPY2A6NKD2 308 aa6.15□□□□□ -1.42
CHD4-205ENST00000536301 PROB1E7EW31 1015 aa6.15□□□□□ -1.42
CHD4-205ENST00000536301 C5orf67F2Z3F1 127 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms