RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 BRDTQ58F21 947 aaPredicted RBP20.04■□□□□ 0.8
PACSIN3-202ENST00000524509 JAKMIP3Q5VZ66 844 aa20.04■□□□□ 0.8
PACSIN3-202ENST00000524509 ARRDC4Q8NCT1 418 aa20.04■□□□□ 0.8
PACSIN3-202ENST00000524509 NAP1L4Q99733 375 aaKnown RBP20.04■□□□□ 0.8
PACSIN3-202ENST00000524509 CCDC194A0A1B0GVG4 234 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 MMP1P03956 469 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 ZNF76P36508 570 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 USP11P51784 963 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 SMAD3P84022 425 aaKnown RBP20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 PRAMEF19Q5SWL8 479 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 SLC39A5Q6ZMH5 540 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 GIMAP8Q8ND71 665 aaPredicted RBP20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 TRPV1Q8NER1 839 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 FBXO18Q8NFZ0 1043 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 WDR11Q9BZH6 1224 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 KATNBL1Q9H079 304 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 ATP11BQ9Y2G3 1177 aa20.03■□□□□ 0.8
PACSIN3-202ENST00000524509 ZNFX1Q9P2E3 1918 aaKnown RBP20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 CYP3A4P08684 503 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 GJB2P29033 226 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 GNL2Q13823 731 aaKnown RBP20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 NONOQ15233 471 aaKnown RBP eCLIP20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 C9orf50Q5SZB4 431 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 GJC2Q5T442 439 aaPredicted RBP20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 KRT40Q6A162 431 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 EEPD1Q7L9B9 569 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 FBXO16Q8IX29 292 aaPredicted RBP20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 GPRASP2Q96D09 838 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 AIFM3Q96NN9 605 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 AP5M1Q9H0R1 490 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 KCNJ14Q9UNX9 436 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 MRVI1Q9Y6F6 885 aa20.02■□□□□ 0.8
PACSIN3-202ENST00000524509 H3BQV1 296 aa20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 FIBPO43427 364 aa20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 ARHGAP4P98171 946 aa20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 SNX17Q15036 470 aa20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 DUSP28Q4G0W2 176 aa20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 TAPT1Q6NXT6 567 aa20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 SEPT14Q6ZU15 432 aa20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 NIPA1Q7RTP0 329 aa20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 RNF180Q86T96 592 aa20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 INPP4AQ96PE3 977 aaPredicted RBP20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 TTYH1Q9H313 450 aaPredicted RBP20.01■□□□□ 0.79
PACSIN3-202ENST00000524509 TTC28Q96AY4 2481 aa20■□□□□ 0.79
PACSIN3-202ENST00000524509 KBTBD13C9JR72 458 aa20■□□□□ 0.79
PACSIN3-202ENST00000524509 ZEB2O60315 1214 aa20■□□□□ 0.79
PACSIN3-202ENST00000524509 TXNP10599 105 aaKnown RBP20■□□□□ 0.79
PACSIN3-202ENST00000524509 ICAM3P32942 547 aa20■□□□□ 0.79
PACSIN3-202ENST00000524509 SETQ01105 290 aaPredicted RBP20■□□□□ 0.79
PACSIN3-202ENST00000524509 NEDD9Q14511 834 aa20■□□□□ 0.79
PACSIN3-202ENST00000524509 CEP55Q53EZ4 464 aa20■□□□□ 0.79
PACSIN3-202ENST00000524509 MYLIPQ8WY64 445 aa20■□□□□ 0.79
PACSIN3-202ENST00000524509 SYMPKQ92797 1274 aaKnown RBP20■□□□□ 0.79
PACSIN3-202ENST00000524509 BADQ92934 168 aa20■□□□□ 0.79
PACSIN3-202ENST00000524509 FOXP1Q9H334 677 aaPredicted RBP20■□□□□ 0.79
PACSIN3-202ENST00000524509 XPNPEP3Q9NQH7 507 aa20■□□□□ 0.79
PACSIN3-202ENST00000524509 SMCHD1A6NHR9 2005 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 M0R2N6 131 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 ADCYAP1R1P41586 468 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 C1orf53Q5VUE5 145 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 LARP1BQ659C4 914 aaKnown RBP19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 MOXD1Q6UVY6 613 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 DIS3L2Q8IYB7 885 aaKnown RBP19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 SENP7Q9BQF6 1050 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 MXRA8Q9BRK3 442 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 JADE2Q9NQC1 790 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 PRDM5Q9NQX1 630 aaPredicted RBP19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 TMEM260Q9NX78 707 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 UBIAD1Q9Y5Z9 338 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 PLXNA1Q9UIW2 1896 aa19.99■□□□□ 0.79
PACSIN3-202ENST00000524509 TMEM265A0A087WTH1 108 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 GH1P01241 217 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 FOSL2P15408 326 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 GCFC2P16383 781 aaKnown RBP19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 CIITAP33076 1130 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 MRPS9P82933 396 aaKnown RBP19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 MTMR1Q13613 665 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 LAMC2Q13753 1193 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 NPY5RQ15761 445 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 TRIM60Q495X7 471 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 PCSK9Q8NBP7 692 aaKnown RBP19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 IL31RAQ8NI17 732 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 PDLIM7Q9NR12 457 aa19.98■□□□□ 0.79
PACSIN3-202ENST00000524509 SPATA31C2B4DYI2 1134 aa19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 KPNA6O60684 536 aa19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 CPT1AP50416 773 aa19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 GJA9P57773 515 aa19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 NKX3-2P78367 333 aa19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 CCDC62Q6P9F0 684 aa19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 TBCKQ8TEA7 893 aa19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 TSEN34Q9BSV6 310 aaKnown RBP19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 RTEL1Q9NZ71 1219 aa19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 DDX41Q9UJV9 622 aaKnown RBP19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 GNEQ9Y223 722 aaKnown RBP19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 MUC3AQ02505 3323 aa19.97■□□□□ 0.79
PACSIN3-202ENST00000524509 TRIM43BA6NCK2 446 aa19.96■□□□□ 0.79
PACSIN3-202ENST00000524509 MEIS1O00470 390 aa19.96■□□□□ 0.79
PACSIN3-202ENST00000524509 SMPD1P17405 629 aa19.96■□□□□ 0.79
PACSIN3-202ENST00000524509 NEK8Q86SG6 692 aa19.96■□□□□ 0.79
PACSIN3-202ENST00000524509 TLK2Q86UE8 772 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms