RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 UPP2O95045 317 aa20.66■□□□□ 0.9
PVT1-220ENST00000524165 RSPH10BP0C881 870 aa20.66■□□□□ 0.9
PVT1-220ENST00000524165 GTF2F1P35269 517 aaKnown RBP eCLIP20.66■□□□□ 0.9
PVT1-220ENST00000524165 NBL1P41271 181 aa20.66■□□□□ 0.9
PVT1-220ENST00000524165 RPS6P62753 249 aaKnown RBP20.66■□□□□ 0.9
PVT1-220ENST00000524165 ALG1Q9BT22 464 aa20.66■□□□□ 0.9
PVT1-220ENST00000524165 PNMA2Q9UL42 364 aa20.66■□□□□ 0.9
PVT1-220ENST00000524165 LINC01565O15544 149 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 GALR2O43603 387 aaPredicted RBP20.65■□□□□ 0.9
PVT1-220ENST00000524165 F2P00734 622 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 GNAT2P19087 354 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 BMPR1AP36894 532 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 MFSD10Q14728 455 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 KIAA0753Q2KHM9 967 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 BTNL9Q6UXG8 535 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 FTSJ3Q8IY81 847 aaKnown RBP20.65■□□□□ 0.9
PVT1-220ENST00000524165 FIBCD1Q8N539 461 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 SMRP1Q8NCR6 262 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 SEPT8Q92599 483 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 IFIH1Q9BYX4 1025 aaKnown RBP20.65■□□□□ 0.9
PVT1-220ENST00000524165 IGFLR1Q9H665 355 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 STX8Q9UNK0 236 aa20.65■□□□□ 0.9
PVT1-220ENST00000524165 RBAK-RBAKDNI3L0D1 243 aa20.64■□□□□ 0.89
PVT1-220ENST00000524165 LINC00271P0C7V0 271 aa20.64■□□□□ 0.89
PVT1-220ENST00000524165 NDUFV1P49821 464 aa20.64■□□□□ 0.89
PVT1-220ENST00000524165 COASYQ13057 564 aa20.64■□□□□ 0.89
PVT1-220ENST00000524165 LY6KQ17RY6 165 aa20.64■□□□□ 0.89
PVT1-220ENST00000524165 EMID1Q96A84 441 aaPredicted RBP20.64■□□□□ 0.89
PVT1-220ENST00000524165 IL17RAQ96F46 866 aa20.64■□□□□ 0.89
PVT1-220ENST00000524165 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.63■□□□□ 0.89
PVT1-220ENST00000524165 MMP1P03956 469 aa20.63■□□□□ 0.89
PVT1-220ENST00000524165 THPOP40225 353 aa20.63■□□□□ 0.89
PVT1-220ENST00000524165 ZNF200P98182 395 aaPredicted RBP20.63■□□□□ 0.89
PVT1-220ENST00000524165 RASGRP2Q7LDG7 609 aa20.63■□□□□ 0.89
PVT1-220ENST00000524165 SERINC5Q86VE9 423 aa20.63■□□□□ 0.89
PVT1-220ENST00000524165 DCAF4Q8WV16 495 aa20.63■□□□□ 0.89
PVT1-220ENST00000524165 PPP2R3CQ969Q6 453 aa20.63■□□□□ 0.89
PVT1-220ENST00000524165 SLC3A2P08195 630 aaKnown RBP20.62■□□□□ 0.89
PVT1-220ENST00000524165 ICAM3P32942 547 aa20.62■□□□□ 0.89
PVT1-220ENST00000524165 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
PVT1-220ENST00000524165 SYDE2Q5VT97 1194 aa20.62■□□□□ 0.89
PVT1-220ENST00000524165 CHST3Q7LGC8 479 aa20.62■□□□□ 0.89
PVT1-220ENST00000524165 APPBP2Q92624 585 aa20.62■□□□□ 0.89
PVT1-220ENST00000524165 CLP1Q92989 425 aaKnown RBP20.62■□□□□ 0.89
PVT1-220ENST00000524165 OSBP2Q969R2 916 aa20.62■□□□□ 0.89
PVT1-220ENST00000524165 PHF7Q9BWX1 381 aaPredicted RBP20.62■□□□□ 0.89
PVT1-220ENST00000524165 CLEC1BQ9P126 229 aa20.62■□□□□ 0.89
PVT1-220ENST00000524165 ZNF292O60281 2723 aa20.62■□□□□ 0.89
PVT1-220ENST00000524165 WDR87Q6ZQQ6 2873 aa20.61■□□□□ 0.89
PVT1-220ENST00000524165 GPAA1O43292 621 aa20.61■□□□□ 0.89
PVT1-220ENST00000524165 APPP05067 770 aa20.61■□□□□ 0.89
PVT1-220ENST00000524165 SLC16A2P36021 539 aa20.61■□□□□ 0.89
PVT1-220ENST00000524165 CCDC96Q2M329 555 aa20.61■□□□□ 0.89
PVT1-220ENST00000524165 DHX37Q8IY37 1157 aaKnown RBP20.61■□□□□ 0.89
PVT1-220ENST00000524165 EFHBQ8N7U6 833 aa20.61■□□□□ 0.89
PVT1-220ENST00000524165 EPG5Q9HCE0 2579 aa20.61■□□□□ 0.89
PVT1-220ENST00000524165 RAB11FIP3O75154 756 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 KDM4AO75164 1064 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 RLBP1P12271 317 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 HIC1Q14526 733 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 TTBK2Q6IQ55 1244 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 SEPT14Q6ZU15 432 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 IFNL3Q8IZI9 196 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 RGS22Q8NE09 1264 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 PPTC7Q8NI37 304 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 APBB2Q92870 758 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 PLVAPQ9BX97 442 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 BCL11AQ9H165 835 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 INCENPQ9NQS7 918 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 IL17RBQ9NRM6 502 aa20.6■□□□□ 0.89
PVT1-220ENST00000524165 WDR19Q8NEZ3 1342 aa20.59■□□□□ 0.89
PVT1-220ENST00000524165 PATL2C9JE40 543 aaKnown RBP20.59■□□□□ 0.89
PVT1-220ENST00000524165 ZNF286BP0CG31 522 aa20.59■□□□□ 0.89
PVT1-220ENST00000524165 LAMC2Q13753 1193 aa20.59■□□□□ 0.89
PVT1-220ENST00000524165 PTPN21Q16825 1174 aa20.59■□□□□ 0.89
PVT1-220ENST00000524165 RIPOR3Q96MK2 946 aa20.59■□□□□ 0.89
PVT1-220ENST00000524165 MAF1Q9H063 256 aa20.59■□□□□ 0.89
PVT1-220ENST00000524165 DDX41Q9UJV9 622 aaKnown RBP20.59■□□□□ 0.89
PVT1-220ENST00000524165 USP15Q9Y4E8 981 aaPredicted RBP20.59■□□□□ 0.89
PVT1-220ENST00000524165 ADGRA3Q8IWK6 1321 aa20.58■□□□□ 0.89
PVT1-220ENST00000524165 CAND2O75155 1236 aa20.58■□□□□ 0.89
PVT1-220ENST00000524165 HOXD8P13378 290 aaPredicted RBP20.58■□□□□ 0.89
PVT1-220ENST00000524165 NOVP48745 357 aa20.58■□□□□ 0.89
PVT1-220ENST00000524165 CAMK1Q14012 370 aa20.58■□□□□ 0.89
PVT1-220ENST00000524165 NKD2Q969F2 451 aaPredicted RBP20.58■□□□□ 0.89
PVT1-220ENST00000524165 RPGRIP1Q96KN7 1286 aa20.58■□□□□ 0.89
PVT1-220ENST00000524165 NACAP1Q9BZK3 213 aa20.58■□□□□ 0.89
PVT1-220ENST00000524165 MTMR7Q9Y216 660 aa20.58■□□□□ 0.89
PVT1-220ENST00000524165 KMT2BQ9UMN6 2715 aaPredicted RBP20.57■□□□□ 0.88
PVT1-220ENST00000524165 TSPY2A6NKD2 308 aa20.57■□□□□ 0.88
PVT1-220ENST00000524165 ATF7P17544 494 aaPredicted RBP20.57■□□□□ 0.88
PVT1-220ENST00000524165 PPARAQ07869 468 aa20.57■□□□□ 0.88
PVT1-220ENST00000524165 MCTP2Q6DN12 878 aa20.57■□□□□ 0.88
PVT1-220ENST00000524165 P2RX5Q93086 422 aa20.57■□□□□ 0.88
PVT1-220ENST00000524165 RC3H2Q9HBD1 1191 aaKnown RBP20.57■□□□□ 0.88
PVT1-220ENST00000524165 PLAGL2Q9UPG8 496 aa20.57■□□□□ 0.88
PVT1-220ENST00000524165 DMXL1Q9Y485 3027 aa20.56■□□□□ 0.88
PVT1-220ENST00000524165 NMT2O60551 498 aa20.56■□□□□ 0.88
PVT1-220ENST00000524165 PPFIA4O75335 1185 aa20.56■□□□□ 0.88
PVT1-220ENST00000524165 STXBP2Q15833 593 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms