RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 STRIP1Q5VSL9 837 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 CEP135Q66GS9 1140 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 LYPD4Q6UWN0 246 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 CHSY3Q70JA7 882 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 TXNRD3Q86VQ6 643 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 NLRP10Q86W26 655 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 FAM9BQ8IZU0 186 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 HERVK_113Q902F9 699 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 BTBD6Q96KE9 485 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 POP1Q99575 1024 aaKnown RBP6.45□□□□□ -1.38
PABPC1-223ENST00000523636 UBA5Q9GZZ9 404 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 ADAM19Q9H013 955 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 PRDM5Q9NQX1 630 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-223ENST00000523636 PPM1HQ9ULR3 514 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 ATP11BQ9Y2G3 1177 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 MTCH2Q9Y6C9 303 aa6.45□□□□□ -1.38
PABPC1-223ENST00000523636 PHIPQ8WWQ0 1821 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 SPEF2Q9C093 1822 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 TEP1Q99973 2627 aaKnown RBP6.44□□□□□ -1.38
PABPC1-223ENST00000523636 DMXL2Q8TDJ6 3036 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 EPOPA6NHQ4 379 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 RFXAPO00287 272 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 DCXO43602 365 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 PARNO95453 639 aaKnown RBP6.44□□□□□ -1.38
PABPC1-223ENST00000523636 RECKO95980 971 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 USP17L7P0C7H9 530 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 ALADP13716 330 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 PTPRAP18433 802 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 POU3F3P20264 500 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-223ENST00000523636 ST13P50502 369 aaKnown RBP6.44□□□□□ -1.38
PABPC1-223ENST00000523636 MAP3K10Q02779 954 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 CACNB2Q08289 660 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-223ENST00000523636 SNX17Q15036 470 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 SF3B3Q15393 1217 aaKnown RBP6.44□□□□□ -1.38
PABPC1-223ENST00000523636 ST3GAL2Q16842 350 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 RPS26P11Q5JNZ5 115 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-223ENST00000523636 C16orf59Q7L2K0 433 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 C3orf58Q8NDZ4 430 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.44□□□□□ -1.38
PABPC1-223ENST00000523636 NKX2-4Q9H2Z4 354 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 VEZTQ9HBM0 779 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 SEC31BQ9NQW1 1179 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 ENAMQ9NRM1 1142 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 MAGEC2Q9UBF1 373 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-223ENST00000523636 COG5Q9UP83 839 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 OTOGLQ3ZCN5 2332 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 MYO3BQ8WXR4 1341 aa6.44□□□□□ -1.38
PABPC1-223ENST00000523636 TENM4Q6N022 2769 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 COL4A4P53420 1690 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-223ENST00000523636 A0A096LPE4 126 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 A0A1W2PPZ6 126 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 SHISA8B8ZZ34 492 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 LILRB5O75023 590 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 ALBP02768 609 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 CTSHP09668 335 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 GRIA4P48058 902 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 RPS8P62241 208 aaKnown RBP6.43□□□□□ -1.38
PABPC1-223ENST00000523636 GRIK5Q16478 980 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 TRIM60Q495X7 471 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 SMC5Q8IY18 1101 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 BSNDQ8WZ55 320 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 HHIPQ96QV1 700 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 BACH2Q9BYV9 841 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 TMEM39BQ9GZU3 492 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 MUC3BQ9H195 1237 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 JPH1Q9HDC5 661 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-223ENST00000523636 BSDC1Q9NW68 430 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-223ENST00000523636 PRKAG2Q9UGJ0 569 aa6.43□□□□□ -1.38
PABPC1-223ENST00000523636 hCG_2014768A0A024R1R8 64 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 CCDC194A0A1B0GVG4 234 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 M0R082 166 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 SCAMP3O14828 347 aaKnown RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 CREB3O43889 395 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 MYL6BP14649 208 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 IL9P15248 144 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 KLRK1P26718 216 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 MMP14P50281 582 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 AFF1P51825 1210 aaKnown RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 OS9Q13438 667 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 DLGAP5Q15398 846 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 TSNAXIP1Q2TAA8 658 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 CFAP100Q494V2 611 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 ZNF385CQ66K41 422 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 SLC39A5Q6ZMH5 540 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 DTHD1Q6ZMT9 781 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 KIF6Q6ZMV9 814 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 ZNF417Q8TAU3 575 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 WHAMMQ8TF30 809 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 NUDT8Q8WV74 236 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 ZNF587Q96SQ5 575 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 PARK7Q99497 189 aaKnown RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 LNPKQ9C0E8 428 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 METTL5Q9NRN9 209 aaKnown RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 STK17AQ9UEE5 414 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 SOX13Q9UN79 622 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 TRIM33Q9UPN9 1127 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 RRP7AQ9Y3A4 280 aaKnown RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 CSADQ9Y600 493 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 GAKO14976 1311 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms