RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 JAK3P52333 1124 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 KRT71Q3SY84 523 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 C4orf50Q6ZRC1 276 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 P2RX5Q93086 422 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 CYP2D7A0A087X1C5 515 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 COPB1P53618 953 aaKnown RBP17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 VSIG1Q86XK7 387 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 PI4K2BQ8TCG2 481 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 STRBPQ96SI9 672 aaKnown RBP17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 ZCCHC11Q5TAX3 1644 aaKnown RBP17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 KIF1BO60333 1816 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 SASH1O94885 1247 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 MYCP01106 439 aaPredicted RBP17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 TRMT2AQ8IZ69 625 aaKnown RBP17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 GCNAQ96QF7 691 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 FEM1BQ9UK73 627 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 CPSF3Q9UKF6 684 aaKnown RBP17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 PHLPP2Q6ZVD8 1323 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 THAP12O43422 761 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 SLFN12LQ6IEE8 588 aa17.69■□□□□ 0.42
PCDHA3-201ENST00000522353 KDM6BO15054 1643 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 CYP19A1P11511 503 aaPredicted RBP17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 GTF2A1P52655 376 aaPredicted RBP17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 ZBED2Q9BTP6 218 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 ZNF148Q9UQR1 794 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 USP17L10C9JJH3 530 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 KIF23Q02241 960 aaPredicted RBP17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 LMNB2Q03252 620 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 RPS6KA2Q15349 733 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 MRFAP1L1Q96HT8 127 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 H7C0C1 242 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 K7ERI5 159 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 SLFN14P0C7P3 912 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 ANXA13P27216 316 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 ATP5OP48047 213 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 TBC1D9BQ66K14 1250 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 CACNA2D3Q8IZS8 1091 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 EIF3CLB5ME19 914 aaKnown RBP17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 MCAMP43121 646 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 PSMD2Q13200 908 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 GKAP1Q5VSY0 366 aaPredicted RBP17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 ZNF449Q6P9G9 518 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 CATSPER4Q7RTX7 472 aa17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 RSRC1Q96IZ7 334 aaKnown RBP17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 EIF3CQ99613 913 aaKnown RBP17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 RPF1Q9H9Y2 349 aaKnown RBP17.68■□□□□ 0.42
PCDHA3-201ENST00000522353 SRGAP2BP0DMP2 458 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 CACNB3P54284 484 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 CEP85LQ5SZL2 805 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 CERKQ8TCT0 537 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 SH3RF3Q8TEJ3 882 aaPredicted RBP17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 CDKL2Q92772 493 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 FDX1P10109 184 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 NFX1Q12986 1120 aaKnown RBP17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 MAN2A1Q16706 1144 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 SH3GLB2Q9NR46 395 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 ANAPC5Q9UJX4 755 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 SHROOM2Q13796 1616 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 PPFIA4O75335 1185 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 COPB2P35606 906 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 ANKRD20A3Q5VUR7 823 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 MCUR1Q96AQ8 359 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 ARPP19P56211 112 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 BRD3Q15059 726 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 UBE2SQ16763 222 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 C7orf31Q8N865 590 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 CABS1Q96KC9 395 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 FAM49AQ9H0Q0 323 aaPredicted RBP17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 NXF1Q9UBU9 619 aaKnown RBP17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
PCDHA3-201ENST00000522353 MEIS1O00470 390 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 CYP2E1P05181 493 aaPredicted RBP17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 PRDX5P30044 214 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 HOXA13P31271 388 aaPredicted RBP17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 RMDN3Q96TC7 470 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 PLA2G4BP0C869 781 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 GBP1P32455 592 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 MXI1P50539 228 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 SP8Q8IXZ3 490 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 RUNDC3BQ96NL0 473 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 SLC8A2Q9UPR5 921 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 AXIN2Q9Y2T1 843 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 MYL3P08590 195 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 ARL6IP4Q66PJ3 421 aaKnown RBP17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 NSUN6Q8TEA1 469 aaKnown RBP17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 PPP4R1Q8TF05 950 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 EPSTI1Q96J88 318 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 NLRP4Q96MN2 994 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 SLC38A10Q9HBR0 1119 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 SPATA31A6Q5VVP1 1343 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 SIX6OS1Q8N1H7 587 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 MICAL1Q8TDZ2 1067 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 CELF1Q92879 486 aaKnown RBP17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 EMILIN3Q9NT22 766 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 EPN1Q9Y6I3 576 aaPredicted RBP17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 CRB1P82279 1406 aa17.66■□□□□ 0.42
PCDHA3-201ENST00000522353 RGS16O15492 202 aaPredicted RBP17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 SRGAP2CP0DJJ0 459 aa17.65■□□□□ 0.42
PCDHA3-201ENST00000522353 VPS41P49754 854 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms