RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ZBTB10Q96DT7 871 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 RBM17Q96I25 401 aaKnown RBP5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 JAKMIP1Q96N16 626 aaKnown RBP5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 PAGR1Q9BTK6 254 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 BCO2Q9BYV7 579 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 LRRC4CQ9HCJ2 640 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 ABCB6Q9NP58 842 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 ZCCHC17Q9NP64 241 aaKnown RBP5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 QPCTLQ9NXS2 382 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 WWC3Q9ULE0 1092 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 AP4E1Q9UPM8 1137 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 ZNF148Q9UQR1 794 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 PPIP5K1Q6PFW1 1433 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 PLB1Q6P1J6 1458 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 PRXQ9BXM0 1461 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 CUX1P39880 1505 aa5.38□□□□□ -1.55
HMGB1P19-201ENST00000517578 LRRD1A4D1F6 860 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 RASSF10A6NK89 507 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 B4DLN1 442 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 PRC1O43663 620 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 ZEB2O60315 1214 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 SHOX2O60902 331 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 DNAJC8O75937 253 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 CCDC159P0C7I6 412 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 ITPKAP23677 461 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 EVCP57679 992 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 ATP2B2Q01814 1243 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 CUL4BQ13620 913 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 GNL2Q13823 731 aaKnown RBP5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 MVPQ14764 893 aaKnown RBP5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 CCDC152Q4G0S7 254 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 Q4G0T1 1027 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 HP1BP3Q5SSJ5 553 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 MIS18BP1Q6P0N0 1132 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 TLDC1Q6P9B6 456 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 NXPE4Q6UWF7 544 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 DTHD1Q6ZMT9 781 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 SYNE3Q6ZMZ3 975 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 TTLL7Q6ZT98 887 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 USP48Q86UV5 1035 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 LCA5Q86VQ0 697 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 ATP11CQ8NB49 1132 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 GLIS3Q8NEA6 775 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 TBC1D31Q96DN5 1066 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 ZMAT2Q96NC0 199 aaKnown RBP5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 IWS1Q96ST2 819 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 GORASP1Q9BQQ3 440 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 CORO1BQ9BR76 489 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 FUCA2Q9BTY2 467 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 WDR18Q9BV38 432 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 VCX3BQ9H321 246 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 VCX3AQ9NNX9 186 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 TMCO1Q9UM00 188 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 EXOC6BQ9Y2D4 811 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 TMED5Q9Y3A6 229 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 AATKQ6ZMQ8 1374 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 SYNMO15061 1565 aa5.37□□□□□ -1.55
HMGB1P19-201ENST00000517578 STXBP3O00186 592 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 AOC2O75106 756 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 ZBED4O75132 1171 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 SMIM24O75264 130 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 RASSF9O75901 435 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 TMCC1O94876 653 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 P4HBP07237 508 aaKnown RBP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 CCDC166P0CW27 439 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 KCNA2P16389 499 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 HSPA4P34932 840 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 ASPAP45381 313 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 AARSP49588 968 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 RHBDL3P58872 404 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 JAG1P78504 1218 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 MRPS25P82663 173 aaKnown RBP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 CYP27A1Q02318 531 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 FMR1Q06787 632 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 CUL4AQ13619 759 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 KCNB1Q14721 858 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 INAQ16352 499 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 VPS53Q5VIR6 699 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 SFMBT2Q5VUG0 894 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 NAA16Q6N069 864 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 PRPF40BQ6NWY9 871 aaKnown RBP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 DZIP1Q86YF9 867 aaKnown RBP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 PEX5LQ8IYB4 626 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 AGBL5Q8NDL9 886 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 PARD3BQ8TEW8 1205 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 USP33Q8TEY7 942 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 CACTINQ8WUQ7 758 aaKnown RBP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 TBC1D5Q92609 795 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 KAT2BQ92831 832 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 GFM2Q969S9 779 aaKnown RBP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 ASIC4Q96FT7 647 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 DHTKD1Q96HY7 919 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 MPHOSPH9Q99550 1183 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 PARD6BQ9BYG5 372 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 VCXQ9H320 206 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 VCPKMTQ9H867 229 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 ZFYVE1Q9HBF4 777 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 PCDH18Q9HCL0 1135 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 RAD18Q9NS91 495 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms