RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 CNOT7Q9UIV1 285 aaKnown RBP17.02■□□□□ 0.31
SDHA-218ENST00000515752 DNM3Q9UQ16 869 aa17.02■□□□□ 0.31
SDHA-218ENST00000515752 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
SDHA-218ENST00000515752 ICAM1P05362 532 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 MUTP22033 750 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 FECHP22830 423 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 USP14P54578 494 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 ECM1Q16610 540 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 CCDC174Q6PII3 467 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 LDHDQ86WU2 507 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 MCF2L2Q86YR7 1114 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 TMTC1Q8IUR5 882 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 DNAJC19Q96DA6 116 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 TUBGCP2Q9BSJ2 902 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 POLR3CQ9BUI4 534 aaPredicted RBP17.01■□□□□ 0.31
SDHA-218ENST00000515752 PANK4Q9NVE7 773 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 PPP2R2CQ9Y2T4 447 aa17.01■□□□□ 0.31
SDHA-218ENST00000515752 MSH4O15457 936 aa17■□□□□ 0.31
SDHA-218ENST00000515752 COBLO75128 1261 aa17■□□□□ 0.31
SDHA-218ENST00000515752 GYPCP04921 128 aa17■□□□□ 0.31
SDHA-218ENST00000515752 ETF1P62495 437 aaKnown RBP17■□□□□ 0.31
SDHA-218ENST00000515752 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
SDHA-218ENST00000515752 ZYXQ15942 572 aaKnown RBP17■□□□□ 0.31
SDHA-218ENST00000515752 ZNF507Q8TCN5 953 aa17■□□□□ 0.31
SDHA-218ENST00000515752 ZNF592Q92610 1267 aa17■□□□□ 0.31
SDHA-218ENST00000515752 SLF1Q9BQI6 1058 aa17■□□□□ 0.31
SDHA-218ENST00000515752 CASP14P31944 242 aa17■□□□□ 0.31
SDHA-218ENST00000515752 COASYQ13057 564 aa17■□□□□ 0.31
SDHA-218ENST00000515752 PTPN21Q16825 1174 aa17■□□□□ 0.31
SDHA-218ENST00000515752 TSR1Q2NL82 804 aaKnown RBP17■□□□□ 0.31
SDHA-218ENST00000515752 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
SDHA-218ENST00000515752 KRT26Q7Z3Y9 468 aa17■□□□□ 0.31
SDHA-218ENST00000515752 CATSPER3Q86XQ3 398 aa17■□□□□ 0.31
SDHA-218ENST00000515752 MYOCDQ8IZQ8 938 aa17■□□□□ 0.31
SDHA-218ENST00000515752 CNOT6LQ96LI5 555 aaKnown RBP17■□□□□ 0.31
SDHA-218ENST00000515752 IGLV3-22A0A075B6J6 115 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 POTEB3A0JP26 581 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 POTECB2RU33 542 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 MED24O75448 989 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 SSBP05455 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
SDHA-218ENST00000515752 CCDC175P0C221 793 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 PRKCSHP14314 528 aaPredicted RBP16.99■□□□□ 0.31
SDHA-218ENST00000515752 MTIF2P46199 727 aaKnown RBP16.99■□□□□ 0.31
SDHA-218ENST00000515752 SYCP1Q15431 976 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 KIF4BQ2VIQ3 1234 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 FKBP15Q5T1M5 1219 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 POTEBQ6S5H4 581 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 MTERF4Q7Z6M4 381 aaKnown RBP16.99■□□□□ 0.31
SDHA-218ENST00000515752 GPBP1Q86WP2 473 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 APOBEC3FQ8IUX4 373 aaKnown RBP16.99■□□□□ 0.31
SDHA-218ENST00000515752 GJA10Q969M2 543 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 SEMA6BQ9H3T3 888 aa16.99■□□□□ 0.31
SDHA-218ENST00000515752 E9PMD0 336 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 CTIFO43310 598 aaKnown RBP16.98■□□□□ 0.31
SDHA-218ENST00000515752 KRT18P05783 430 aaKnown RBP16.98■□□□□ 0.31
SDHA-218ENST00000515752 CYP11B2P19099 503 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 SLC12A3P55017 1021 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 GHRHRQ02643 423 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 GOLGA8FQ08AF8 430 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 GOLGA8DPQ0D2H9 430 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 R3HDM1Q15032 1099 aaKnown RBP16.98■□□□□ 0.31
SDHA-218ENST00000515752 CEP55Q53EZ4 464 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 REXO1L1PQ8IX06 675 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 SYT2Q8N9I0 419 aaPredicted RBP16.98■□□□□ 0.31
SDHA-218ENST00000515752 CPLX3Q8WVH0 158 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 WDR11Q9BZH6 1224 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 TUFT1Q9NNX1 390 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 HACL1Q9UJ83 578 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 VAV3Q9UKW4 847 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 CCPG1Q9ULG6 757 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 PHLPP2Q6ZVD8 1323 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 SHTN1A0MZ66 631 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 FRMD3A2A2Y4 597 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 PES1O00541 588 aaKnown RBP16.98■□□□□ 0.31
SDHA-218ENST00000515752 GNA14O95837 355 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 HSD17B4P51659 736 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 TBC1D8BQ0IIM8 1120 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 PPP2R5CQ13362 524 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 CYP26C1Q6V0L0 522 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 SLC5A5Q92911 643 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 WDR18Q9BV38 432 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 NOC4LQ9BVI4 516 aaKnown RBP16.98■□□□□ 0.31
SDHA-218ENST00000515752 GLIS2Q9BZE0 524 aaPredicted RBP16.98■□□□□ 0.31
SDHA-218ENST00000515752 AS3MTQ9HBK9 375 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 ABHD10Q9NUJ1 306 aa16.98■□□□□ 0.31
SDHA-218ENST00000515752 LUC7L2Q9Y383 392 aaKnown RBP16.98■□□□□ 0.31
SDHA-218ENST00000515752 SPATA31C1P0DKV0 1188 aa16.97■□□□□ 0.31
SDHA-218ENST00000515752 STAT3P40763 770 aa16.97■□□□□ 0.31
SDHA-218ENST00000515752 FXR1P51114 621 aaKnown RBP eCLIP16.97■□□□□ 0.31
SDHA-218ENST00000515752 FKBP3Q00688 224 aaKnown RBP16.97■□□□□ 0.31
SDHA-218ENST00000515752 FIGNQ5HY92 759 aa16.97■□□□□ 0.31
SDHA-218ENST00000515752 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
SDHA-218ENST00000515752 SAMD7Q7Z3H4 446 aa16.97■□□□□ 0.31
SDHA-218ENST00000515752 OR8K1Q8NGG5 319 aa16.97■□□□□ 0.31
SDHA-218ENST00000515752 FBXO28Q9NVF7 368 aa16.97■□□□□ 0.31
SDHA-218ENST00000515752 CAPN11Q9UMQ6 739 aa16.97■□□□□ 0.31
SDHA-218ENST00000515752 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
SDHA-218ENST00000515752 MEIS1O00470 390 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms