RNA–Protein interactions for RNA: ENST00000511071.5

ZFYVE28-208, Transcript of zinc finger FYVE-type containing 28, human

APPRIS ALT2 TSL 5 BASIC

Gene ZFYVE28, Length 3,273 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZFYVE28-208	ENST00000511071	YTHDF3	Q7Z739	585 aa	Known RBP	18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	GPIHBP1	Q8IV16	184 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	WHAMM	Q8TF30	809 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	GEMIN8	Q9NWZ8	242 aa	Known RBP	18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	PCDHGC5	Q9Y5F6	944 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	COL14A1	Q05707	1796 aa	Known RBP	18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	TXK	P42681	527 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	FBXW10	Q5XX13	1052 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	DYM	Q7RTS9	669 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	INPP4A	Q96PE3	977 aa	Predicted RBP	18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	MEFV	O15553	781 aa	Predicted RBP	18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	FSBP	O95073	299 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	FNTA	P49354	379 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	NAP1L1	P55209	391 aa	Known RBP	18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	TMC4	Q7Z404	712 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	CASKIN2	Q8WXE0	1202 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	STX8	Q9UNK0	236 aa		18.71	■□□□□ 0.59
ZFYVE28-208	ENST00000511071	ESYT3	A0FGR9	886 aa		18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	CDC37	Q16543	378 aa	Predicted RBP	18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	ZCWPW2	Q504Y3	356 aa		18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	TDRD12	Q587J7	1177 aa	Known RBP	18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SFMBT2	Q5VUG0	894 aa		18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	DZIP1	Q86YF9	867 aa	Known RBP	18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	IFT81	Q8WYA0	676 aa		18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	RAD54L	Q92698	747 aa		18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	MYB	P10242	640 aa		18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SPTY2D1	Q68D10	685 aa	Predicted RBP	18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	TSG101	Q99816	390 aa		18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	CPVL	Q9H3G5	476 aa		18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	LUC7L	Q9NQ29	371 aa	Known RBP	18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	MTMR7	Q9Y216	660 aa		18.7	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	NR1D1	P20393	614 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SLC10A5	Q5PT55	438 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	FAM83B	Q5T0W9	1011 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	NAA35	Q5VZE5	725 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	ATP6V1G3	Q96LB4	118 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	ATP6V0A2	Q9Y487	856 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	NAV1	Q8NEY1	1877 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SRRM3	A6NNA2	597 aa	Predicted RBP	18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	PPP1R37	O75864	691 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	RASA1	P20936	1047 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SMARCA1	P28370	1054 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	GUCY1A3	Q02108	690 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	CALCRL	Q16602	461 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	18.69	■□□□□ 0.58	1e-6	■■■■■ 62.5
ZFYVE28-208	ENST00000511071	KRT12	Q99456	494 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	TMEM59L	Q9UK28	342 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	COL4A3BP	Q9Y5P4	624 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	ESYT2	A0FGR8	921 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	KLRC1	P26715	233 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	PDIA5	Q14554	519 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SLC18A3	Q16572	532 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	PTGIS	Q16647	500 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	EIF1AD	Q8N9N8	165 aa	Known RBP	18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	GLIS3	Q8NEA6	775 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	DDX12P	Q92771	950 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	ANKRD2	Q9GZV1	360 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	NLRC4	Q9NPP4	1024 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	IRS2	Q9Y4H2	1338 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	ATAD5	Q96QE3	1844 aa		18.69	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	HMGB1P1	B2RPK0	211 aa	Predicted RBP	18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	FTCD	O95954	541 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	HSPA9	P38646	679 aa	Known RBP	18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	RPS8	P62241	208 aa	Known RBP	18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SOGA3	Q5TF21	947 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	REXO1	Q8N1G1	1221 aa	Known RBP	18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SLC44A5	Q8NCS7	719 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	TANGO6	Q9C0B7	1094 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	LRRC27	Q9C0I9	530 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	CES2	O00748	559 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	KIAA0754	O94854	1291 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	USP8	P40818	1118 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	GUCY2F	P51841	1108 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	FKBP3	Q00688	224 aa	Known RBP	18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	ITGB3BP	Q13352	177 aa	Predicted RBP	18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	TMEM119	Q4V9L6	283 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	OTUD6B	Q8N6M0	293 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	CDK5RAP3	Q96JB5	506 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	BIN2	Q9UBW5	565 aa	Predicted RBP	18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	ERCC3	P19447	782 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	MDH1	P40925	334 aa	Known RBP	18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	MICALCL	Q6ZW33	695 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	USP38	Q8NB14	1042 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	ZNF473	Q8WTR7	871 aa	Known RBP	18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	GGA2	Q9UJY4	613 aa		18.68	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	EDIL3	O43854	480 aa		18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	TMEM266	Q2M3C6	531 aa		18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	NCAPG	Q9BPX3	1015 aa		18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SEC63	Q9UGP8	760 aa	Known RBP	18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	CAPN7	Q9Y6W3	813 aa		18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	COL5A3	P25940	1745 aa	Predicted RBP	18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	LRRC41	Q15345	812 aa		18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	TXNRD3	Q86VQ6	643 aa		18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	MYOCD	Q8IZQ8	938 aa		18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	TMEM260	Q9NX78	707 aa		18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	JAG2	Q9Y219	1238 aa		18.67	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	BTNL10	A8MVZ5	291 aa		18.66	■□□□□ 0.58
ZFYVE28-208	ENST00000511071	SLC37A4	O43826	429 aa		18.66	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms