RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 HAO1Q9UJM8 370 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 CAPN11Q9UMQ6 739 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 V9GY48 417 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ABCC6O95255 1503 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 H0YGN5 161 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 PFDN1O60925 122 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 SUPT3HO75486 399 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 FERP16591 822 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 KLRC1P26715 233 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 PLTPP55058 493 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 RCN2Q14257 317 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 NT5DC1Q5TFE4 455 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ZNF530Q6P9A1 599 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ZC3H18Q86VM9 953 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 LINS1Q8NG48 757 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 PSMD1Q99460 953 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 DNAJC7Q99615 494 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 DSCC1Q9BVC3 393 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 KDM4CQ9H3R0 1056 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 GDF3Q9NR23 364 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 RNF14Q9UBS8 474 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 BLOC1S6Q9UL45 172 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 SRPRBQ9Y5M8 271 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 NFS1Q9Y697 457 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 TRIM75PA6NK02 468 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ZSCAN9O15535 394 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 SART1O43290 800 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 PRKAB2O43741 272 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 CDKL5O76039 1030 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 MMP1P03956 469 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 RPN1P04843 607 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 SP100P23497 879 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ABCD1P33897 745 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ATP11AP98196 1134 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 GCKRQ14397 625 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 LRRC41Q15345 812 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 NTRK3Q16288 839 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 MUM1Q2TAK8 710 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 BICDL1Q6ZP65 573 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 PIK3AP1Q6ZUJ8 805 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 APBB1IPQ7Z5R6 666 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ARFGAP2Q8N6H7 521 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 NUDCD1Q96RS6 583 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 KCNQ5Q9NR82 932 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 TACC3Q9Y6A5 838 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 COQ9O75208 318 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 BPIFB4P59827 614 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 LRRC36Q1X8D7 754 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 LACTB2Q53H82 288 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 LMBRD2Q68DH5 695 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 ANKRD40Q6AI12 368 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 AADACL2Q6P093 401 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 TRIM42Q8IWZ5 723 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 GALNT15Q8N3T1 639 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 FAM133AQ8N9E0 248 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 HOMER3Q9NSC5 361 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 ETNK2Q9NVF9 386 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 WDR35Q9P2L0 1181 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 SNX24Q9Y343 169 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 SLC4A7Q9Y6M7 1214 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 KIAA1210Q9ULL0 1709 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 NEURL1BA8MQ27 555 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 H7C1W4 665 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 STK10O94804 968 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 FGFR4P22455 802 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 CA8P35219 290 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 USP46P62068 366 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 NEXNQ0ZGT2 675 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 ZNF211Q13398 564 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 DRP2Q13474 957 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 CHRNA2Q15822 529 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 DDB1Q16531 1140 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 IL17AQ16552 155 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 NCAPG2Q86XI2 1143 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 MAGEC3Q8TD91 643 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 CCDC97Q96F63 343 aaPredicted RBP7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 BICD1Q96G01 975 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 NDNQ99608 321 aa7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 TDRKHQ9Y2W6 561 aaKnown RBP7.93□□□□□ -1.14
LIMCH1-207ENST00000508466 LGALS16A8MUM7 142 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 CBX6O95503 412 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 TCP1P17987 556 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 ECHS1P30084 290 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 PTDSS1P48651 473 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 LACTBP83111 547 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 ZNF268Q14587 947 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 KIAA0753Q2KHM9 967 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 CACNA2D4Q7Z3S7 1137 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 MFN1Q8IWA4 741 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 HELBQ8NG08 1087 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 MAIP1Q8WWC4 291 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 UTP4Q969X6 686 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 MKNK1Q9BUB5 465 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 EXOC1Q9NV70 894 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 CTNNAL1Q9UBT7 734 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 SLC12A4Q9UP95 1085 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 ZNF711Q9Y462 761 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 A6NJR5 290 aa7.92□□□□□ -1.14
LIMCH1-207ENST00000508466 KRIT1O00522 736 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms