RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TLR10Q9BXR5 811 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 FAM184BQ9ULE4 1060 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 NPHP3-ACAD11A0A0J9YXS1 232 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 GOLGA6BA6NDN3 693 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 F8W031 263 aaPredicted RBP14.41□□□□□ -0.1
PTPN7-217ENST00000495688 TRAF5O00463 557 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 RPS6KA5O75582 802 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 IVLP07476 585 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 ARID5AQ03989 594 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 PDXDC1Q6P996 788 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 DPP8Q6V1X1 898 aaPredicted RBP14.41□□□□□ -0.1
PTPN7-217ENST00000495688 NELFCDQ8IXH7 590 aa14.41□□□□□ -0.1
PTPN7-217ENST00000495688 RBM12Q9NTZ6 932 aaKnown RBP14.41□□□□□ -0.1
PTPN7-217ENST00000495688 NOL4O94818 638 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 NAP1L1P55209 391 aaKnown RBP14.4□□□□□ -0.1
PTPN7-217ENST00000495688 COASYQ13057 564 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 EHD4Q9H223 541 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 RABEP2Q9H5N1 569 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 JMJD4Q9H9V9 463 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 ZNF831Q5JPB2 1677 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 VGLL3A8MV65 326 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 E9PMD0 336 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 SMARCA1P28370 1054 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 NOVP48745 357 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 PDIA5Q14554 519 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 TMEM119Q4V9L6 283 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 CCDC181Q5TID7 509 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 KLHDC7AQ5VTJ3 777 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 HAUS3Q68CZ6 603 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 IQCEQ6IPM2 695 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 PRR5LQ6MZQ0 368 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 ADGRF4Q8IZF3 695 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 MYOCDQ8IZQ8 938 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 ALS2CR12Q96Q35 445 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 DDX25Q9UHL0 483 aaKnown RBP14.4□□□□□ -0.1
PTPN7-217ENST00000495688 HYOU1Q9Y4L1 999 aa14.4□□□□□ -0.1
PTPN7-217ENST00000495688 ZSCAN5CA6NGD5 496 aaPredicted RBP14.39□□□□□ -0.11
PTPN7-217ENST00000495688 POLR2FP61218 127 aaKnown RBP14.39□□□□□ -0.11
PTPN7-217ENST00000495688 ZCWPW2Q504Y3 356 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 TSEN2Q8NCE0 465 aaKnown RBP14.39□□□□□ -0.11
PTPN7-217ENST00000495688 RPGRQ92834 1020 aaKnown RBP14.39□□□□□ -0.11
PTPN7-217ENST00000495688 RAB34Q9BZG1 259 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 POLLQ9UGP5 575 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 IL1R1P14778 569 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 CCDC40Q4G0X9 1142 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 FAM83BQ5T0W9 1011 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 KCTD1Q719H9 257 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 DDX4Q9NQI0 724 aaKnown RBP14.39□□□□□ -0.11
PTPN7-217ENST00000495688 PANK4Q9NVE7 773 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 PACSIN2Q9UNF0 486 aaPredicted RBP14.39□□□□□ -0.11
PTPN7-217ENST00000495688 DAGLAQ9Y4D2 1042 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 COL4A3BPQ9Y5P4 624 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 MYH7BA7E2Y1 1941 aa14.39□□□□□ -0.11
PTPN7-217ENST00000495688 ESYT3A0FGR9 886 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 GOLGA6CA6NDK9 693 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 MARCH6O60337 910 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 FTCDO95954 541 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 GOLGA6DP0CG33 693 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 PRLRP16471 622 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 TCP1P17987 556 aaKnown RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 ORC2Q13416 577 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 FAM26FQ5R3K3 315 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 TRAPPC3LQ5T215 181 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 TTC19Q6DKK2 380 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 CCDC70Q6NSX1 233 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 FAM196AQ6ZSG2 479 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 BBXQ8WY36 941 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 IQCDQ96DY2 449 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 C8orf37Q96NL8 207 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 RASSF4Q9H2L5 321 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 GOLGA6AQ9NYA3 693 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 GGA1Q9UJY5 639 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 PJA2O43164 708 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 FGFR1OPO95684 399 aaKnown RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 RNASE9P60153 205 aaKnown RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 GTF2IP78347 998 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 FKBP3Q00688 224 aaKnown RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 KCTD19Q17RG1 926 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 DNAJC21Q5F1R6 531 aaKnown RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 ZNF572Q7Z3I7 529 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 TSG101Q99816 390 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 LSM14BQ9BX40 385 aaKnown RBP14.38□□□□□ -0.11
PTPN7-217ENST00000495688 STIM2Q9P246 746 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 PCDHA12Q9UN75 941 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 KIAA1024Q9UPX6 916 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 BTAF1O14981 1849 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 SRCAPQ6ZRS2 3230 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L15C9J2P7 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L10C9JJH3 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L13C9JLJ4 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L11C9JVI0 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L18D6R9N7 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L22D6RA61 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L17D6RBQ6 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L19D6RCP7 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L20D6RJB6 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 SNHG28P0DPA3 235 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 PLCG2P16885 1265 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 USP17L24Q0WX57 530 aa14.38□□□□□ -0.11
PTPN7-217ENST00000495688 ASPRV1Q53RT3 343 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms