RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 E7EWF7 191 aa26.93■■□□□ 1.9
COL27A1-208ENST00000494780 CXCL10P02778 98 aa26.93■■□□□ 1.9
COL27A1-208ENST00000494780 CKBP12277 381 aa26.93■■□□□ 1.9
COL27A1-208ENST00000494780 CCND2P30279 289 aa26.93■■□□□ 1.9
COL27A1-208ENST00000494780 PTK7Q13308 1070 aa26.93■■□□□ 1.9
COL27A1-208ENST00000494780 SPATA33Q96N06 139 aa26.93■■□□□ 1.9
COL27A1-208ENST00000494780 SENP2Q9HC62 589 aa26.93■■□□□ 1.9
COL27A1-208ENST00000494780 TNFRSF10AO00220 468 aa26.92■■□□□ 1.9
COL27A1-208ENST00000494780 CYTH3O43739 400 aa26.92■■□□□ 1.9
COL27A1-208ENST00000494780 GGPS1O95749 300 aa26.92■■□□□ 1.9
COL27A1-208ENST00000494780 CNKSR3Q6P9H4 555 aa26.92■■□□□ 1.9
COL27A1-208ENST00000494780 IL31RAQ8NI17 732 aa26.92■■□□□ 1.9
COL27A1-208ENST00000494780 MYH7BA7E2Y1 1941 aa26.92■■□□□ 1.9
COL27A1-208ENST00000494780 SGSM2O43147 1006 aa26.91■■□□□ 1.9
COL27A1-208ENST00000494780 GTPBP6O43824 516 aaPredicted RBP26.91■■□□□ 1.9
COL27A1-208ENST00000494780 UBA1P22314 1058 aaKnown RBP26.91■■□□□ 1.9
COL27A1-208ENST00000494780 WDR5P61964 334 aaKnown RBP26.91■■□□□ 1.9
COL27A1-208ENST00000494780 TAP1Q03518 808 aa26.91■■□□□ 1.9
COL27A1-208ENST00000494780 HSDL1Q3SXM5 330 aa26.91■■□□□ 1.9
COL27A1-208ENST00000494780 MICALL1Q8N3F8 863 aa26.91■■□□□ 1.9
COL27A1-208ENST00000494780 CERS4Q9HA82 394 aa26.91■■□□□ 1.9
COL27A1-208ENST00000494780 TAF6LQ9Y6J9 622 aa26.91■■□□□ 1.9
COL27A1-208ENST00000494780 CHD7Q9P2D1 2997 aa26.9■■□□□ 1.9
COL27A1-208ENST00000494780 TLL1O43897 1013 aa26.9■■□□□ 1.9
COL27A1-208ENST00000494780 NBNO60934 754 aa26.9■■□□□ 1.9
COL27A1-208ENST00000494780 SP2Q02086 613 aa26.9■■□□□ 1.9
COL27A1-208ENST00000494780 CATIPQ7Z7H3 387 aa26.9■■□□□ 1.9
COL27A1-208ENST00000494780 FCHSD1Q86WN1 690 aa26.9■■□□□ 1.9
COL27A1-208ENST00000494780 MTCH2Q9Y6C9 303 aa26.9■■□□□ 1.9
COL27A1-208ENST00000494780 RFXAPO00287 272 aa26.89■■□□□ 1.9
COL27A1-208ENST00000494780 TRIM71Q2Q1W2 868 aaKnown RBP26.89■■□□□ 1.9
COL27A1-208ENST00000494780 MLXIPQ9HAP2 919 aa26.89■■□□□ 1.9
COL27A1-208ENST00000494780 ABHD14A-ACY1A0A1B0GW23 586 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 EPOPA6NHQ4 379 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 SORBS3O60504 671 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 EFCAB14O75071 495 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 ARHGEF15O94989 841 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 ANTXR2P58335 489 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 IL27Q8NEV9 243 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 IGDCC4Q8TDY8 1250 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 ADAMTS19Q8TE59 1207 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 ARNTL2Q8WYA1 636 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 MAP4K1Q92918 833 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 C16orf70Q9BSU1 422 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 BAZ2BQ9UIF8 2168 aaKnown RBP26.88■■□□□ 1.89
COL27A1-208ENST00000494780 FRMPD4Q14CM0 1322 aa26.88■■□□□ 1.89
COL27A1-208ENST00000494780 STAM2O75886 525 aa26.87■■□□□ 1.89
COL27A1-208ENST00000494780 ZNF200P98182 395 aaPredicted RBP26.87■■□□□ 1.89
COL27A1-208ENST00000494780 GNPTABQ3T906 1256 aa26.87■■□□□ 1.89
COL27A1-208ENST00000494780 ZNF618Q5T7W0 954 aa26.87■■□□□ 1.89
COL27A1-208ENST00000494780 TRAF7Q6Q0C0 670 aa26.87■■□□□ 1.89
COL27A1-208ENST00000494780 MB21D2Q8IYB1 491 aaPredicted RBP26.87■■□□□ 1.89
COL27A1-208ENST00000494780 GPKOWQ92917 476 aaPredicted RBP eCLIP26.87■■□□□ 1.89
COL27A1-208ENST00000494780 ZFP91Q96JP5 570 aaPredicted RBP26.87■■□□□ 1.89
COL27A1-208ENST00000494780 MAP3K14Q99558 947 aa26.87■■□□□ 1.89
COL27A1-208ENST00000494780 ICAM3P32942 547 aa26.86■■□□□ 1.89
COL27A1-208ENST00000494780 DEFB103AP81534 67 aa26.86■■□□□ 1.89
COL27A1-208ENST00000494780 WNT8BQ93098 351 aa26.86■■□□□ 1.89
COL27A1-208ENST00000494780 ZBED2Q9BTP6 218 aa26.86■■□□□ 1.89
COL27A1-208ENST00000494780 PTPRSQ13332 1948 aa26.86■■□□□ 1.89
COL27A1-208ENST00000494780 IKBKEQ14164 716 aa26.85■■□□□ 1.89
COL27A1-208ENST00000494780 HIC1Q14526 733 aa26.85■■□□□ 1.89
COL27A1-208ENST00000494780 SERINC5Q86VE9 423 aa26.85■■□□□ 1.89
COL27A1-208ENST00000494780 INPP4AQ96PE3 977 aaPredicted RBP26.85■■□□□ 1.89
COL27A1-208ENST00000494780 SPZ1Q9BXG8 430 aa26.85■■□□□ 1.89
COL27A1-208ENST00000494780 PRRC2BQ5JSZ5 2229 aaKnown RBP26.84■■□□□ 1.89
COL27A1-208ENST00000494780 H3BRB1 525 aa26.84■■□□□ 1.89
COL27A1-208ENST00000494780 DDAH1O94760 285 aa26.84■■□□□ 1.89
COL27A1-208ENST00000494780 SMARCA1P28370 1054 aa26.84■■□□□ 1.89
COL27A1-208ENST00000494780 KIF5BP33176 963 aa26.84■■□□□ 1.89
COL27A1-208ENST00000494780 MRPS9P82933 396 aaKnown RBP26.84■■□□□ 1.89
COL27A1-208ENST00000494780 NEDD9Q14511 834 aa26.84■■□□□ 1.89
COL27A1-208ENST00000494780 SKIV2LQ15477 1246 aaKnown RBP26.84■■□□□ 1.89
COL27A1-208ENST00000494780 AAK1Q2M2I8 961 aa26.84■■□□□ 1.89
COL27A1-208ENST00000494780 TCTN1Q2MV58 587 aa26.84■■□□□ 1.89
COL27A1-208ENST00000494780 CTCFLQ8NI51 663 aaPredicted RBP26.84■■□□□ 1.89
COL27A1-208ENST00000494780 UHRF1Q96T88 793 aaPredicted RBP26.84■■□□□ 1.89
COL27A1-208ENST00000494780 MTA3Q9BTC8 594 aa26.84■■□□□ 1.89
COL27A1-208ENST00000494780 TUT1Q9H6E5 874 aaKnown RBP26.84■■□□□ 1.89
COL27A1-208ENST00000494780 RBM8AQ9Y5S9 174 aaKnown RBP26.84■■□□□ 1.89
COL27A1-208ENST00000494780 EMSYQ7Z589 1322 aa26.84■■□□□ 1.89
COL27A1-208ENST00000494780 C17orf102A2RUQ5 167 aa26.83■■□□□ 1.89
COL27A1-208ENST00000494780 SPATA31C2B4DYI2 1134 aa26.83■■□□□ 1.89
COL27A1-208ENST00000494780 LGR5O75473 907 aa26.83■■□□□ 1.89
COL27A1-208ENST00000494780 GJB5O95377 273 aa26.83■■□□□ 1.89
COL27A1-208ENST00000494780 MBTPS1Q14703 1052 aa26.83■■□□□ 1.89
COL27A1-208ENST00000494780 TMCO2Q7Z6W1 182 aaPredicted RBP26.83■■□□□ 1.89
COL27A1-208ENST00000494780 ZNF654Q8IZM8 581 aa26.83■■□□□ 1.89
COL27A1-208ENST00000494780 PIBF1Q8WXW3 757 aa26.83■■□□□ 1.89
COL27A1-208ENST00000494780 RRP36Q96EU6 259 aaKnown RBP26.83■■□□□ 1.89
COL27A1-208ENST00000494780 RAD9AQ99638 391 aa26.83■■□□□ 1.89
COL27A1-208ENST00000494780 LY9Q9HBG7 655 aa26.83■■□□□ 1.89
COL27A1-208ENST00000494780 LCHNA4D1U4 455 aa26.82■■□□□ 1.88
COL27A1-208ENST00000494780 NOP56O00567 594 aaKnown RBP26.82■■□□□ 1.88
COL27A1-208ENST00000494780 FIBPO43427 364 aa26.82■■□□□ 1.88
COL27A1-208ENST00000494780 LGALS2P05162 132 aa26.82■■□□□ 1.88
COL27A1-208ENST00000494780 HOXC8P31273 242 aa26.82■■□□□ 1.88
COL27A1-208ENST00000494780 GRB10Q13322 594 aa26.82■■□□□ 1.88
COL27A1-208ENST00000494780 CASC1Q6TDU7 716 aa26.82■■□□□ 1.88
COL27A1-208ENST00000494780 METTL7BQ6UX53 244 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms