RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 KIAA0753Q2KHM9 967 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 TJAP1Q5JTD0 557 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 CELF3Q5SZQ8 465 aaKnown RBP22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 LRRC8DQ7L1W4 858 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 FCHSD1Q86WN1 690 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 IL31RAQ8NI17 732 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 CTCFLQ8NI51 663 aaPredicted RBP22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 IGDCC4Q8TDY8 1250 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 SPATA33Q96N06 139 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 CTAGE1Q96RT6 745 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 ALG1Q9BT22 464 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 FRMPD4Q14CM0 1322 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 STAM2O75886 525 aa22.53■■□□□ 1.2
R3HDM1-215ENST00000483021 MYOGP15173 224 aa22.53■■□□□ 1.2
R3HDM1-215ENST00000483021 UBA1P22314 1058 aaKnown RBP22.53■■□□□ 1.2
R3HDM1-215ENST00000483021 GNPTABQ3T906 1256 aa22.53■■□□□ 1.2
R3HDM1-215ENST00000483021 CASC1Q6TDU7 716 aa22.53■■□□□ 1.2
R3HDM1-215ENST00000483021 PPM1EQ8WY54 764 aa22.53■■□□□ 1.2
R3HDM1-215ENST00000483021 SPZ1Q9BXG8 430 aa22.53■■□□□ 1.2
R3HDM1-215ENST00000483021 KIF28PB7ZC32 967 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 CA3P07451 260 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 SMARCA1P28370 1054 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 KCNJ6P48051 423 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 PTK7Q13308 1070 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 HSDL1Q3SXM5 330 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 ZNF654Q8IZM8 581 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 DHX38Q92620 1227 aaKnown RBP22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 LZTS2Q9BRK4 669 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 MLXIPQ9HAP2 919 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 LY9Q9HBG7 655 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 THEGQ9P2T0 379 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 REV3LO60673 3130 aa22.52■■□□□ 1.2
R3HDM1-215ENST00000483021 CKBP12277 381 aa22.51■■□□□ 1.19
R3HDM1-215ENST00000483021 HERC6Q8IVU3 1022 aa22.51■■□□□ 1.19
R3HDM1-215ENST00000483021 TMTC2Q8N394 836 aa22.51■■□□□ 1.19
R3HDM1-215ENST00000483021 ATXN2LQ8WWM7 1075 aaKnown RBP22.51■■□□□ 1.19
R3HDM1-215ENST00000483021 RRP36Q96EU6 259 aaKnown RBP22.51■■□□□ 1.19
R3HDM1-215ENST00000483021 SEC63Q9UGP8 760 aaKnown RBP22.51■■□□□ 1.19
R3HDM1-215ENST00000483021 DOCK5Q9H7D0 1870 aa22.51■■□□□ 1.19
R3HDM1-215ENST00000483021 PRC1O43663 620 aa22.5■■□□□ 1.19
R3HDM1-215ENST00000483021 MCM5P33992 734 aa22.5■■□□□ 1.19
R3HDM1-215ENST00000483021 GNAQP50148 359 aa22.5■■□□□ 1.19
R3HDM1-215ENST00000483021 SP2Q02086 613 aa22.5■■□□□ 1.19
R3HDM1-215ENST00000483021 CNKSR3Q6P9H4 555 aa22.5■■□□□ 1.19
R3HDM1-215ENST00000483021 TMEM87BQ96K49 555 aa22.5■■□□□ 1.19
R3HDM1-215ENST00000483021 MUC3AQ02505 3323 aa22.49■■□□□ 1.19
R3HDM1-215ENST00000483021 CXCL10P02778 98 aa22.49■■□□□ 1.19
R3HDM1-215ENST00000483021 ICAM3P32942 547 aa22.49■■□□□ 1.19
R3HDM1-215ENST00000483021 PIBF1Q8WXW3 757 aa22.49■■□□□ 1.19
R3HDM1-215ENST00000483021 CUL5Q93034 780 aa22.49■■□□□ 1.19
R3HDM1-215ENST00000483021 INPP4AQ96PE3 977 aaPredicted RBP22.49■■□□□ 1.19
R3HDM1-215ENST00000483021 TSPYL2Q9H2G4 693 aaPredicted RBP22.49■■□□□ 1.19
R3HDM1-215ENST00000483021 CCDC69A6NI79 296 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 NOP56O00567 594 aaKnown RBP22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 SORBS3O60504 671 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 EFCAB14O75071 495 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 WDR5P61964 334 aaKnown RBP22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 NEDD9Q14511 834 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 GPNMBQ14956 572 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 NFXL1Q6ZNB6 911 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 SMARCC2Q8TAQ2 1214 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 C16orf70Q9BSU1 422 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 MYL10Q9BUA6 226 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 LSG1Q9H089 658 aaKnown RBP22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 PRDM6Q9NQX0 595 aa22.48■■□□□ 1.19
R3HDM1-215ENST00000483021 PIK3CDO00329 1044 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 SH2B2O14492 632 aaPredicted RBP22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 FIBPO43427 364 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 CALM1P0DP23 149 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 CALM2P0DP24 149 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 CALM3P0DP25 149 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 MRPS9P82933 396 aaKnown RBP22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 CCDC85BQ15834 202 aaPredicted RBP22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 TRIM71Q2Q1W2 868 aaKnown RBP22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 XRRA1Q6P2D8 792 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 METTL7BQ6UX53 244 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 GPKOWQ92917 476 aaPredicted RBP eCLIP22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 ZFP91Q96JP5 570 aaPredicted RBP22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 ESYT1Q9BSJ8 1104 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 EMSYQ7Z589 1322 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 NCOR1O75376 2440 aa22.47■■□□□ 1.19
R3HDM1-215ENST00000483021 COL4A4P53420 1690 aaPredicted RBP22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 ABHD14A-ACY1A0A1B0GW23 586 aa22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 H3BRB1 525 aa22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 GTPBP6O43824 516 aaPredicted RBP22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 TLL1O43897 1013 aa22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 NBNO60934 754 aa22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 LIFRP42702 1097 aa22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 SERINC5Q86VE9 423 aa22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 USP26Q9BXU7 913 aa22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 TUT1Q9H6E5 874 aaKnown RBP22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 MICAL3Q7RTP6 2002 aa22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 PRRC2BQ5JSZ5 2229 aaKnown RBP22.46■■□□□ 1.19
R3HDM1-215ENST00000483021 C17orf102A2RUQ5 167 aa22.45■■□□□ 1.18
R3HDM1-215ENST00000483021 SPATA31C2B4DYI2 1134 aa22.45■■□□□ 1.18
R3HDM1-215ENST00000483021 SLC27A2O14975 620 aa22.45■■□□□ 1.18
R3HDM1-215ENST00000483021 LGALS2P05162 132 aa22.45■■□□□ 1.18
R3HDM1-215ENST00000483021 POU3F3P20264 500 aaPredicted RBP22.45■■□□□ 1.18
R3HDM1-215ENST00000483021 TAP1Q03518 808 aa22.45■■□□□ 1.18
R3HDM1-215ENST00000483021 ZNF618Q5T7W0 954 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms