RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ERICH2A1L162 156 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 GCOM1H8Y6P7 765 aaPredicted RBP13.52□□□□□ -0.25
VARS2-208ENST00000477052 NBNO60934 754 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 POLR2MP0CAP2 368 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 CKBP12277 381 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 SELPP16109 830 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 UBA1P22314 1058 aaKnown RBP13.52□□□□□ -0.25
VARS2-208ENST00000477052 RFC2P35250 354 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 DEFB103AP81534 67 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 TFF2Q03403 129 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 TAP1Q03518 808 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 LAMC2Q13753 1193 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 CELF3Q5SZQ8 465 aaKnown RBP13.52□□□□□ -0.25
VARS2-208ENST00000477052 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 FAM117BQ6P1L5 589 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 LRRC8DQ7L1W4 858 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 CMTR1Q8N1G2 835 aaKnown RBP13.52□□□□□ -0.25
VARS2-208ENST00000477052 NCOA7Q8NI08 942 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 IGDCC4Q8TDY8 1250 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 RTEL1Q9NZ71 1219 aa13.52□□□□□ -0.25
VARS2-208ENST00000477052 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.25
VARS2-208ENST00000477052 PNMA6FA0A0J9YX94 578 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 HAS3O00219 553 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 F2P00734 622 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 RXRAP19793 462 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 CCND2P30279 289 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 WDR5P61964 334 aaKnown RBP13.51□□□□□ -0.25
VARS2-208ENST00000477052 GHRHRQ02643 423 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 MBTPS1Q14703 1052 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 TRIM71Q2Q1W2 868 aaKnown RBP13.51□□□□□ -0.25
VARS2-208ENST00000477052 ZNF618Q5T7W0 954 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 TRAF7Q6Q0C0 670 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 SESTD1Q86VW0 696 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 MB21D2Q8IYB1 491 aaPredicted RBP13.51□□□□□ -0.25
VARS2-208ENST00000477052 AFAP1L1Q8TED9 768 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 EMID1Q96A84 441 aaPredicted RBP13.51□□□□□ -0.25
VARS2-208ENST00000477052 ASB2Q96Q27 587 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 SLC9A7Q96T83 725 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 MAF1Q9H063 256 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 THEGQ9P2T0 379 aa13.51□□□□□ -0.25
VARS2-208ENST00000477052 PRRC2BQ5JSZ5 2229 aaKnown RBP13.5□□□□□ -0.25
VARS2-208ENST00000477052 hCG_1642624A0A1W2PR95 340 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 TLL1O43897 1013 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 PLEKHA8P1O95397 391 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 KCNJ6P48051 423 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 MRPS9P82933 396 aaKnown RBP13.5□□□□□ -0.25
VARS2-208ENST00000477052 SP4Q02446 784 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 SKIV2LQ15477 1246 aaKnown RBP13.5□□□□□ -0.25
VARS2-208ENST00000477052 USP17L6PQ6QN14 398 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 CATIPQ7Z7H3 387 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 CCDC155Q8N6L0 562 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 CAGE1Q8TC20 777 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 SYMPKQ92797 1274 aaKnown RBP13.5□□□□□ -0.25
VARS2-208ENST00000477052 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 NECAB3Q96P71 396 aaPredicted RBP13.5□□□□□ -0.25
VARS2-208ENST00000477052 C16orf70Q9BSU1 422 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 LRRC2Q9BYS8 371 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 OSBPL7Q9BZF2 842 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 MLXIPQ9HAP2 919 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 LY9Q9HBG7 655 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 MTUS1Q9ULD2 1270 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 MTCH2Q9Y6C9 303 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 DOCK5Q9H7D0 1870 aa13.5□□□□□ -0.25
VARS2-208ENST00000477052 PRC1O43663 620 aa13.49□□□□□ -0.25
VARS2-208ENST00000477052 SEMA3FQ13275 785 aa13.49□□□□□ -0.25
VARS2-208ENST00000477052 SART3Q15020 963 aaKnown RBP13.49□□□□□ -0.25
VARS2-208ENST00000477052 TRIM50Q86XT4 487 aa13.49□□□□□ -0.25
VARS2-208ENST00000477052 ZNF654Q8IZM8 581 aa13.49□□□□□ -0.25
VARS2-208ENST00000477052 ADAMTS19Q8TE59 1207 aa13.49□□□□□ -0.25
VARS2-208ENST00000477052 ATXN2LQ8WWM7 1075 aaKnown RBP13.49□□□□□ -0.25
VARS2-208ENST00000477052 ZBED2Q9BTP6 218 aa13.49□□□□□ -0.25
VARS2-208ENST00000477052 KATNAL1Q9BW62 490 aa13.49□□□□□ -0.25
VARS2-208ENST00000477052 TCF20Q9UGU0 1960 aaKnown RBP13.49□□□□□ -0.25
VARS2-208ENST00000477052 PPFIA4O75335 1185 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 LGALS2P05162 132 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 HOXD8P13378 290 aaPredicted RBP13.48□□□□□ -0.25
VARS2-208ENST00000477052 THPOP40225 353 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 KCNQ1P51787 676 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 MRPS5P82675 430 aaKnown RBP13.48□□□□□ -0.25
VARS2-208ENST00000477052 PTK7Q13308 1070 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 GRB10Q13322 594 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 CNKSR3Q6P9H4 555 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.48□□□□□ -0.25
VARS2-208ENST00000477052 NFXL1Q6ZNB6 911 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 CYFIP1Q7L576 1253 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
VARS2-208ENST00000477052 PHOSPHO2Q8TCD6 241 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 GDPD5Q8WTR4 605 aa13.48□□□□□ -0.25
VARS2-208ENST00000477052 MAP3K20Q9NYL2 800 aaKnown RBP13.48□□□□□ -0.25
VARS2-208ENST00000477052 TRANK1O15050 2925 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 KIF28PB7ZC32 967 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 H3BRB1 525 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 TNFRSF10AO00220 468 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 SLC27A2O14975 620 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 TREHO43280 583 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 BAIAP3O94812 1187 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 CXCL10P02778 98 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 CTSHP09668 335 aa13.47□□□□□ -0.25
VARS2-208ENST00000477052 SMIM10L2AP0DMW4 78 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms