RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PAPOLAP51003 745 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 IRAK1P51617 712 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 PDE4BQ07343 736 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 HYAL2Q12891 473 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 CUL3Q13618 768 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 CUL4BQ13620 913 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 NAA25Q14CX7 972 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 KRTAP5-3Q6L8H2 238 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 SAPCD2Q86UD0 394 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 STK11IPQ8N1F8 1099 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 PGBD3Q8N328 593 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 SPC24Q8NBT2 197 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 GATAD2BQ8WXI9 593 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 PMM1Q92871 262 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 SMARCC1Q92922 1105 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 SLC35B4Q969S0 331 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 HOOK2Q96ED9 719 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 NAP1L3Q99457 506 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 SLC39A3Q9BRY0 314 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 TCHPQ9BT92 498 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 TNKS2Q9H2K2 1166 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 RPAP3Q9H6T3 665 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 ZNHIT6Q9NWK9 470 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 COMMD8Q9NX08 183 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 DKK3Q9UBP4 350 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 GPN3Q9UHW5 284 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 TMED5Q9Y3A6 229 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 CDK13Q14004 1512 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 PREX1Q8TCU6 1659 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 A0A096LPE4 126 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 A0A1W2PPZ6 126 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 FAM221AA4D161 298 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 PABPN1LA6NDY0 278 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 TMEM221A6NGB7 291 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 GOLGA8AA7E2F4 631 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 NEMFO60524 1076 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 KIAA0754O94854 1291 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 PSAPP07602 524 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 RPSAP08865 295 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 LMNB1P20700 586 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 ZNF157P51786 506 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 MECOMQ03112 1051 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 EIF4A2Q14240 407 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 PLCB4Q15147 1175 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 RCN1Q15293 331 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 SEPT7Q16181 437 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 CWF19L2Q2TBE0 894 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 RASIP1Q5U651 963 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 TLDC1Q6P9B6 456 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 CWC27Q6UX04 472 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 C17orf53Q8N3J3 647 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 GABPB2Q8TAK5 448 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 LMBR1Q8WVP7 490 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 PNMA5Q96PV4 448 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 GORASP1Q9BQQ3 440 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 CORO1BQ9BR76 489 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 MIR1-1HGQ9H1L0 117 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 ZNF576Q9H609 170 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 TLR7Q9NYK1 1049 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 UBAP1Q9NZ09 502 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 SEL1LQ9UBV2 794 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 ZMAT5Q9UDW3 170 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 CROTQ9UKG9 612 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 PAIP2BQ9ULR5 123 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 PYCARDQ9ULZ3 195 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 ZNF510Q9Y2H8 683 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 FAN1Q9Y2M0 1017 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 ARHGEF12Q9NZN5 1544 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 DISP3Q9P2K9 1392 aa6.68□□□□□ -1.34
ECHDC1-215ENST00000475319 TRAPPC8Q9Y2L5 1435 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 SYCE3A1L190 88 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 LRRC10BA6NIK2 292 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 RNF8O76064 485 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 F11P03951 625 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 MYCLP1P12525 358 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 SOX18P35713 384 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 MAGEA10P43363 369 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 CEBPAP49715 358 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 ZNF165P49910 485 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 CSE1LP55060 971 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 MPP2Q14168 576 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 TKFCQ3LXA3 575 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 MTERF2Q49AM1 385 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 C4orf46Q504U0 113 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 CAPRIN2Q6IMN6 1127 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 NAA16Q6N069 864 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 GK5Q6ZS86 529 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 TTLL7Q6ZT98 887 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 C16orf86Q6ZW13 317 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 UHMK1Q8TAS1 419 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 ASAP3Q8TDY4 903 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 TEKT4Q8WW24 435 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 NSUN5Q96P11 429 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 BHLHE41Q9C0J9 482 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 TRMT1Q9NXH9 659 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 CHPF2Q9P2E5 772 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 CORO1CQ9ULV4 474 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 PCDHGC5Q9Y5F6 944 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 PTPRTO14522 1441 aa6.67□□□□□ -1.34
ECHDC1-215ENST00000475319 DCDC2BA2VCK2 349 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms