RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 FAM167BQ9BTA0 163 aa8.75□□□□□ -1.01
TPM3-215ENST00000469717 TSGA10Q9BZW7 698 aa8.75□□□□□ -1.01
TPM3-215ENST00000469717 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.75□□□□□ -1.012e-12■■□□□ 14
TPM3-215ENST00000469717 LRP6O75581 1613 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 GOLGA6L10A6NI86 522 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 TBC1D22AQ8WUA7 517 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 TATDN2Q93075 761 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 P2RX5Q93086 422 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 ZNF570Q96NI8 536 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 RMND1Q9NWS8 449 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 AGAP1Q9UPQ3 857 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 MYH1P12882 1939 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 ANP32DO95626 131 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 XBP1P17861 261 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 TNFRSF8P28908 595 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 KCNJ2P63252 427 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 XRCC4Q13426 336 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 PPP4R3AQ6IN85 833 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 GIMAP8Q8ND71 665 aaPredicted RBP8.74□□□□□ -1.01
TPM3-215ENST00000469717 UHMK1Q8TAS1 419 aaKnown RBP8.74□□□□□ -1.01
TPM3-215ENST00000469717 MICAL1Q8TDZ2 1067 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 AGAP11Q8TF27 550 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 INPP4AQ96PE3 977 aaPredicted RBP8.74□□□□□ -1.01
TPM3-215ENST00000469717 CELF4Q9BZC1 486 aaKnown RBP8.74□□□□□ -1.01
TPM3-215ENST00000469717 SEMA6BQ9H3T3 888 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 CNNM2Q9H8M5 875 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 ACTR5Q9H9F9 607 aaPredicted RBP8.74□□□□□ -1.01
TPM3-215ENST00000469717 CCNL1Q9UK58 526 aaPredicted RBP8.74□□□□□ -1.01
TPM3-215ENST00000469717 PNMA2Q9UL42 364 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 SIK3Q9Y2K2 1263 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 ABCC12Q96J65 1359 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 WTIPA6NIX2 430 aaPredicted RBP8.74□□□□□ -1.01
TPM3-215ENST00000469717 ITGA4P13612 1032 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 PRLRP16471 622 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 CD302Q8IX05 232 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 KIF2BQ8N4N8 673 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 NOX5Q96PH1 765 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 DPH5Q9H2P9 285 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 ABCF2Q9UG63 623 aa8.74□□□□□ -1.01
TPM3-215ENST00000469717 NIP7Q9Y221 180 aaKnown RBP eCLIP8.74□□□□□ -1.01
TPM3-215ENST00000469717 KCNK3O14649 394 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 DAPK3O43293 454 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 TLR2O60603 784 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 DRD4P21917 467 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 HSPA9P38646 679 aaKnown RBP8.73□□□□□ -1.01
TPM3-215ENST00000469717 THEMIS2Q5TEJ8 643 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 EMC10Q5UCC4 262 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 BZW1Q7L1Q6 419 aaKnown RBP8.73□□□□□ -1.01
TPM3-215ENST00000469717 C4orf32Q8N8J7 132 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 KIAA0895Q8NCT3 520 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 CUL5Q93034 780 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 YIPF3Q9GZM5 350 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 JAG2Q9Y219 1238 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 KCNQ2O43526 872 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 DIAPH2O60879 1101 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 COPB2P35606 906 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 PPP2R2AP63151 447 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 ASIC1P78348 528 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 GRIK3Q13003 919 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 KRT71Q3SY84 523 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 FAM47AQ5JRC9 791 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 IFIT1BQ5T764 474 aaKnown RBP8.73□□□□□ -1.01
TPM3-215ENST00000469717 ARMC3Q5W041 872 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 FMNL3Q8IVF7 1028 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 VGLL2Q8N8G2 317 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 SPATA5Q8NB90 893 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 BAP1Q92560 729 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 ARHGEF10LQ9HCE6 1279 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 ABCF3Q9NUQ8 709 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 AMACRQ9UHK6 382 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 CD2APQ9Y5K6 639 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 SCN11AQ9UI33 1791 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 A6NNZ2 444 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 CTNND1O60716 968 aaKnown RBP8.73□□□□□ -1.01
TPM3-215ENST00000469717 PLCG1P19174 1290 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 IFNAR2P48551 515 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 SARNPP82979 210 aaKnown RBP8.73□□□□□ -1.01
TPM3-215ENST00000469717 TROAPQ12815 778 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 LRRC41Q15345 812 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 ZKSCAN8Q15776 578 aaPredicted RBP8.73□□□□□ -1.01
TPM3-215ENST00000469717 TUBB8Q3ZCM7 444 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 GKAP1Q5VSY0 366 aaPredicted RBP8.73□□□□□ -1.01
TPM3-215ENST00000469717 HGSNATQ68CP4 663 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 MREGQ8N565 214 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 KCNV2Q8TDN2 545 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 ERGIC2Q96RQ1 377 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.73□□□□□ -1.01
TPM3-215ENST00000469717 TANGO6Q9C0B7 1094 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 NDST4Q9H3R1 872 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 TAF1DQ9H5J8 278 aaPredicted RBP8.73□□□□□ -1.01
TPM3-215ENST00000469717 BSDC1Q9NW68 430 aaPredicted RBP8.73□□□□□ -1.01
TPM3-215ENST00000469717 PCDH11XQ9BZA7 1347 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 PCDH11YQ9BZA8 1340 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 ATRNO75882 1429 aa8.73□□□□□ -1.01
TPM3-215ENST00000469717 MAP3K13O43283 966 aa8.72□□□□□ -1.01
TPM3-215ENST00000469717 PPIP5K2O43314 1243 aa8.72□□□□□ -1.01
TPM3-215ENST00000469717 PRPF3O43395 683 aaKnown RBP8.72□□□□□ -1.01
TPM3-215ENST00000469717 RHOBTB3O94955 611 aa8.72□□□□□ -1.01
TPM3-215ENST00000469717 SHBGP04278 402 aa8.72□□□□□ -1.01
TPM3-215ENST00000469717 CCNE1P24864 410 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms