RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ZNF263O14978 683 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 RSPH10BP0C881 870 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 AMPD3Q01432 767 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 GPBP1Q86WP2 473 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 PSMB7Q99436 277 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 FOCADQ5VW36 1801 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 PSMD14O00487 310 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 CFBP00751 764 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 FAM83BQ5T0W9 1011 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 PARD6BQ9BYG5 372 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 TTYH3Q9C0H2 523 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 PANK4Q9NVE7 773 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 SIPA1L1O43166 1804 aa16.47■□□□□ 0.23
SF1-211ENST00000448404 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
SF1-211ENST00000448404 SASH3O75995 380 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 PLA2G4BP0C869 781 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 TMEM119Q4V9L6 283 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 HERC4Q5GLZ8 1057 aaPredicted RBP16.46■□□□□ 0.23
SF1-211ENST00000448404 PPP4R3AQ6IN85 833 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 CENPPQ6IPU0 288 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 CCDC47Q96A33 483 aaKnown RBP16.46■□□□□ 0.23
SF1-211ENST00000448404 CCDC17Q96LX7 622 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 IDI2Q9BXS1 227 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.46■□□□□ 0.23
SF1-211ENST00000448404 CAPN11Q9UMQ6 739 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 TRAF5O00463 557 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 DNM2P50570 870 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 ARID5AQ03989 594 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 KCNA1Q09470 495 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 RBM26Q5T8P6 1007 aaKnown RBP16.46■□□□□ 0.23
SF1-211ENST00000448404 TATDN1Q6P1N9 297 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 CATSPER3Q86XQ3 398 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 NOA1Q8NC60 698 aaKnown RBP16.46■□□□□ 0.23
SF1-211ENST00000448404 PIGOQ8TEQ8 1089 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 NAA15Q9BXJ9 866 aaKnown RBP16.46■□□□□ 0.23
SF1-211ENST00000448404 EHD4Q9H223 541 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 CUEDC2Q9H467 287 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 NHEJ1Q9H9Q4 299 aaPredicted RBP16.46■□□□□ 0.23
SF1-211ENST00000448404 FHOD1Q9Y613 1164 aa16.46■□□□□ 0.23
SF1-211ENST00000448404 ZNF185O15231 689 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
SF1-211ENST00000448404 ARSHQ5FYA8 562 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 CCDC122Q5T0U0 273 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 LRRC55Q6ZSA7 311 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 FBXO11Q86XK2 927 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 KSR1Q8IVT5 923 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 DNAJC7Q99615 494 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 NDST4Q9H3R1 872 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 GOLGA6L9A6NEM1 432 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 EML1O00423 815 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 ATP1A1P05023 1023 aaKnown RBP16.45■□□□□ 0.22
SF1-211ENST00000448404 SLC15A2Q16348 729 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 SYDE2Q5VT97 1194 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 TMEM179Q6ZVK1 233 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 LENG9Q96B70 501 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 PNKPQ96T60 521 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 DHX36Q9H2U1 1008 aaKnown RBP16.45■□□□□ 0.22
SF1-211ENST00000448404 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
SF1-211ENST00000448404 NYAP2Q9P242 653 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 PRR12Q9ULL5 1215 aa16.45■□□□□ 0.22
SF1-211ENST00000448404 BICDL2A1A5D9 508 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 EGFRP00533 1210 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 BMP3P12645 472 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 TAF3Q5VWG9 929 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 RRAGAQ7L523 313 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 SH2D3AQ9BRG2 576 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 SMARCAL1Q9NZC9 954 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 FZD1Q9UP38 647 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 CTAGE9A4FU28 777 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 EFCAB8A8MWE9 144 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 NT5C2P49902 561 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 DNA2P51530 1060 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 CHMP4BP1P59074 171 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 PDIA5Q14554 519 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 FAM26FQ5R3K3 315 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
SF1-211ENST00000448404 KIAA1328Q86T90 577 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 AMNQ9BXJ7 453 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 RAB34Q9BZG1 259 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 PPP1R1BQ9UD71 204 aaPredicted RBP16.44■□□□□ 0.22
SF1-211ENST00000448404 STK17AQ9UEE5 414 aa16.44■□□□□ 0.22
SF1-211ENST00000448404 ZMYND10O75800 440 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 MYL1P05976 194 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 CYP11B2P19099 503 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 FECHP22830 423 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 RXRBP28702 533 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 CTTNQ14247 550 aaKnown RBP16.43■□□□□ 0.22
SF1-211ENST00000448404 VWA3BQ502W6 1294 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 LARGE2Q8N3Y3 721 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 MLXIPQ9HAP2 919 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 KCNMB3Q9NPA1 279 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 SERPINA10Q9UK55 444 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 BCS1LQ9Y276 419 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 PNMA6AP0CW24 399 aaPredicted RBP16.43■□□□□ 0.22
SF1-211ENST00000448404 NBPF9Q3BBW0 867 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 RSRC2Q7L4I2 434 aaKnown RBP16.43■□□□□ 0.22
SF1-211ENST00000448404 MKL1Q969V6 931 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 ARHGAP20Q9P2F6 1191 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 COL4A5P29400 1685 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms