RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 CCDC93Q567U6 631 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 CCDC170Q8IYT3 715 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 MAIP1Q8WWC4 291 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 ATP6V0A1Q93050 837 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 NOD1Q9Y239 953 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 ATP1A2P50993 1020 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 SEPT2Q15019 361 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 PARVGQ9HBI0 331 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 C21orf2O43822 256 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 PPP2R5EQ16537 467 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 BPIFA3Q9BQP9 254 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 ADRA2BP18089 450 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 ARL1P40616 181 aaPredicted RBP24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 MESDQ14696 234 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 EAPPQ56P03 285 aaPredicted RBP24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 INTS8Q75QN2 995 aaKnown RBP24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 CAMTA2O94983 1202 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 SRBD1Q8N5C6 995 aaKnown RBP24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 UHMK1Q8TAS1 419 aaKnown RBP24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 OSBPL5Q9H0X9 879 aaPredicted RBP24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 TMEM260Q9NX78 707 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 FAM205CA6NFA0 338 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 KRT15P19012 456 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 ALDH3A1P30838 453 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 INPP5BP32019 993 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 CA8P35219 290 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 CTTNQ14247 550 aaKnown RBP24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 ARHGAP27Q6ZUM4 889 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 SULF1Q8IWU6 871 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 NT5C1BQ96P26 610 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 GCNT4Q9P109 453 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 SEPT9Q9UHD8 586 aaPredicted RBP24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 USP17L10C9JJH3 530 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 TAOK1Q7L7X3 1001 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 PPANQ9NQ55 473 aaKnown RBP24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 FTCDO95954 541 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 KIF11P52732 1056 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 MAP3K9P80192 1104 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 GPSM2P81274 684 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 UNC13DQ70J99 1090 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 ADAMTS1Q9UHI8 967 aa24.49■■□□□ 1.51
CTDSPL-206ENST00000443503 MOCS3O95396 460 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 DDIT3P35638 169 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 PODNQ7Z5L7 613 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 BARHL2Q9NY43 387 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 SFI1A8K8P3 1242 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 RGS16O15492 202 aaPredicted RBP24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 GFPT2O94808 682 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 LMNB1P20700 586 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 CALRP27797 417 aaKnown RBP24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 DHX40Q8IX18 779 aaKnown RBP24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 CEP170P1Q96L14 293 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 PARD6BQ9BYG5 372 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 TRIM7Q9C029 511 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 EIF2AK2P19525 551 aaKnown RBP24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 RXRBP28702 533 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 SF3B3Q15393 1217 aaKnown RBP24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 C12orf60Q5U649 245 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 SENP2Q9HC62 589 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 AFF2P51816 1311 aa24.48■■□□□ 1.51
CTDSPL-206ENST00000443503 TEX33O43247 280 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 DAPK3O43293 454 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 RASA3Q14644 834 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 TOGARAM2Q6ZUX3 1019 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 GPATCH11Q8N954 259 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 NEDD1Q8NHV4 660 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 RNF34Q969K3 372 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 PARP2Q9UGN5 583 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 GNGT1P63211 74 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 MARCH10Q8NA82 808 aaPredicted RBP24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 USP32Q8NFA0 1604 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 CCDC151A5D8V7 595 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 TMEM191BP0C7N4 346 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 METTL16Q86W50 562 aaKnown RBP24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 MED4Q9NPJ6 270 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 FDPSP14324 419 aaKnown RBP24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 NSFP46459 744 aaKnown RBP24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 SNX16P57768 344 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 CCDC14Q49A88 953 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 PIGOQ8TEQ8 1089 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 EPB41L4AQ9HCS5 686 aaPredicted RBP24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 POLD4Q9HCU8 107 aa24.47■■□□□ 1.51
CTDSPL-206ENST00000443503 LGALS16A8MUM7 142 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 TBC1D8O95759 1140 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 ATF7P17544 494 aaPredicted RBP24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 LLGL1Q15334 1064 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 SLC7A3Q8WY07 619 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 REREQ9P2R6 1566 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 CLCN6P51797 869 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 PTK2Q05397 1052 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 NRBP2Q9NSY0 501 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 POTEDQ86YR6 584 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 TTLL6Q8N841 843 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 ACCSQ96QU6 501 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 JRKLQ9Y4A0 524 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 USP27XA6NNY8 438 aa24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 YWHAEP62258 255 aaKnown RBP24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 ATP2C1P98194 919 aaPredicted RBP24.46■■□□□ 1.51
CTDSPL-206ENST00000443503 ZNF772Q68DY9 489 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms