RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ENAHQ8N8S7 591 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 VPS37AQ8NEZ2 397 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 TDRD7Q8NHU6 1098 aaKnown RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 EXOC6Q8TAG9 804 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 LPIN2Q92539 896 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 ITPKCQ96DU7 683 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 IFT43Q96FT9 208 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 CDK15Q96Q40 435 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 YIPF4Q9BSR8 244 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 RSPH9Q9H1X1 276 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 TNKS2Q9H2K2 1166 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 EFCC1Q9HA90 598 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 ETNK1Q9HBU6 452 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 IL1RAPL2Q9NP60 686 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 NGRNQ9NPE2 291 aaKnown RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 KLK14Q9P0G3 267 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 PUF60Q9UHX1 559 aaKnown RBP5.29□□□□□ -1.56
SF3B1-202ENST00000409915 PCDHAC2Q9Y5I4 1007 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 SCN4AP35499 1836 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 PSME4Q14997 1843 aa5.29□□□□□ -1.56
SF3B1-202ENST00000409915 AOX1Q06278 1338 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 RAD50Q92878 1312 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 TMEM238LA0A1B0GVL6 79 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 VGLL3A8MV65 326 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 VSTM5A8MXK1 200 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 TRAF5O00463 557 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 TNFRSF21O75509 655 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 DDAH1O94760 285 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 PF4P02776 101 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 CPEP16870 476 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 RPS12P25398 132 aaKnown RBP5.28□□□□□ -1.56
SF3B1-202ENST00000409915 HTR3AP46098 478 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 WDR4P57081 412 aaKnown RBP5.28□□□□□ -1.56
SF3B1-202ENST00000409915 CBX2Q14781 532 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-202ENST00000409915 CAVIN4Q5BKX8 364 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 MFSD14BQ5SR56 506 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 STRIP1Q5VSL9 837 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 KANK3Q6NY19 840 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 NECAB2Q7Z6G3 386 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 BPHLQ86WA6 291 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-202ENST00000409915 LDHDQ86WU2 507 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 TREML1Q86YW5 311 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 EGFL6Q8IUX8 553 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 SLITRK4Q8IW52 837 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 GOLM1Q8NBJ4 401 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 SMC1BQ8NDV3 1235 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 AGBL3Q8NEM8 1001 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 SNX29Q8TEQ0 813 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 CHMP4CQ96CF2 233 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 TIFAQ96CG3 184 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 XAGE2Q96GT9 111 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 FERD3LQ96RJ6 166 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 DBNDD2Q9BQY9 259 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 SELENOOQ9BVL4 669 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 GLIS2Q9BZE0 524 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-202ENST00000409915 CCDC8Q9H0W5 538 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-202ENST00000409915 ADARB2Q9NS39 739 aaKnown RBP5.28□□□□□ -1.56
SF3B1-202ENST00000409915 OBP2AQ9NY56 170 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 SLC5A4Q9NY91 659 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 GGA3Q9NZ52 723 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 MAPRE3Q9UPY8 281 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 FPGT-TNNI3KV9GXZ4 949 aa5.28□□□□□ -1.56
SF3B1-202ENST00000409915 FAM205AQ6ZU69 1335 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 B2RBV5 119 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 PRRT4C9JH25 899 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 ADM5C9JUS6 153 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 H7C1D1 291 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 TERTO14746 1132 aaKnown RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 HMMRO75330 724 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 EYA4O95677 639 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 FAM153BP0C7A2 387 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 SERPINB3P29508 390 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 PRDX5P30044 214 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 HALP42357 657 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 ZNF280AP59817 542 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 SCARF1Q14162 830 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 PPP2R5EQ16537 467 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 RTN1Q16799 776 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 NBPF9Q3BBW0 867 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 SEZ6Q53EL9 994 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 ANGEL2Q5VTE6 544 aaKnown RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 CC2D1AQ6P1N0 951 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 USP50Q70EL3 339 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 STRA8Q7Z7C7 330 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 NBPF11Q86T75 865 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 AACSQ86V21 672 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 PNMA8AQ86V59 439 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 ZNF354CQ86Y25 554 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 RPAP2Q8IXW5 612 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 ALDH16A1Q8IZ83 802 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 PHC3Q8NDX5 983 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 ST13P5Q8NFI4 369 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 PJA1Q8NG27 643 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 OR6P1Q8NGX9 317 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 RHPN1Q8TCX5 695 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 JPH3Q8WXH2 748 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 DPF2Q92785 391 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 EAF2Q96CJ1 260 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 ZFP42Q96MM3 310 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 SCLT1Q96NL6 688 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms