RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 FAAP100Q0VG06 881 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 PPP2R5BQ15173 497 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 DUSP28Q4G0W2 176 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 RNF20Q5VTR2 975 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 C1orf53Q5VUE5 145 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 ARHGEF16Q5VV41 709 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 SEPT14Q6ZU15 432 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 MICU3Q86XE3 530 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 CCDC82Q8N4S0 544 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 SRBD1Q8N5C6 995 aaKnown RBP6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 OR6J1Q8NGC5 347 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 IL31RAQ8NI17 732 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 CTCFLQ8NI51 663 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 NSUN6Q8TEA1 469 aaKnown RBP6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 BADQ92934 168 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 GLT1D1Q96MS3 346 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 LBHD1Q9BQE6 289 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 V9GY48 417 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 GRIN2DO15399 1336 aa6.68□□□□□ -1.34
HMGB1P20-201ENST00000402555 LOC102724159A0A0B4J2E5 919 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 PNMA6FA0A0J9YX94 578 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 A0A0U1RQG5 324 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 DCDC2CA8MYV0 355 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 ARVCFO00192 962 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 SORBS3O60504 671 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 NR3C2P08235 984 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 TXNP10599 105 aaKnown RBP6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 MYCLP12524 364 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 KIF5BP33176 963 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 LIFRP42702 1097 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 CDK7P50613 346 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 EPHB4P54760 987 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 COPS2P61201 443 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 NKX3-2P78367 333 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 EXOSC10Q01780 885 aaKnown RBP6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 PWP2Q15269 919 aaKnown RBP6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 LY6KQ17RY6 165 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 C9orf50Q5SZB4 431 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 CCDC62Q6P9F0 684 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 FCHSD1Q86WN1 690 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 TDHQ8IZJ6 230 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 SCFD2Q8WU76 684 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 RRP36Q96EU6 259 aaKnown RBP6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 JAKMIP1Q96N16 626 aaKnown RBP6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 MPHOSPH6Q99547 160 aaKnown RBP6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 PDCD2LQ9BRP1 358 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 MTA3Q9BTC8 594 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 SPZ1Q9BXG8 430 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 PPP1R12CQ9BZL4 782 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 PRKD2Q9BZL6 878 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 PXMP2Q9NR77 195 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 TMEM39AQ9NV64 488 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 PPP4R2Q9NY27 417 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 BRPF3Q9ULD4 1205 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 SNX14Q9Y5W7 946 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 SLC12A7Q9Y666 1083 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 KIAA1217Q5T5P2 1943 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 ELP1O95163 1332 aa6.67□□□□□ -1.34
HMGB1P20-201ENST00000402555 KLF18A0A0U1RQI7 1052 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 A0A1W2PPC1 479 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 B4DLN1 442 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 GCOM1H8Y6P7 765 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 RBAK-RBAKDNI3L0D1 243 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 KIAA0355O15063 1070 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 ZEB2O60315 1214 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 POLR2MP0CAP2 368 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 RAG1P15918 1043 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 HSPA4P34932 840 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 GNAQP50148 359 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 MRPL12P52815 198 aaKnown RBP6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 CHMP4BP1P59074 171 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 PURAQ00577 322 aaKnown RBP6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 GHRHRQ02643 423 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 ARHGAP1Q07960 439 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 ITGA7Q13683 1181 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 TTLL4Q14679 1199 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 LAPTM4AQ15012 233 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 PGM5Q15124 567 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 SHHQ15465 462 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 STXBP2Q15833 593 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 TSGA10IPQ3SY00 556 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 APOA5Q6Q788 366 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 USP17L6PQ6QN14 398 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 TMTC3Q6ZXV5 915 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 DHX32Q7L7V1 743 aaKnown RBP6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 ANKRD33Q7Z3H0 272 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 SGMS1Q86VZ5 419 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 FAM126BQ8IXS8 530 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 TMTC2Q8N394 836 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 FANCBQ8NB91 859 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 SLC43A3Q8NBI5 491 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 AFG1LQ8WV93 481 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 GPKOWQ92917 476 aaPredicted RBP eCLIP6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 TOX2Q96NM4 488 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 IWS1Q96ST2 819 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 MAP3K14Q99558 947 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 TRPV6Q9H1D0 765 aa6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 SEC63Q9UGP8 760 aaKnown RBP6.66□□□□□ -1.34
HMGB1P20-201ENST00000402555 TBX21Q9UL17 535 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms