RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 ZNF34Q8IZ26 560 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 TBC1D5Q92609 795 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.09■□□□□ 0.49
CNP-201ENST00000393888 COL1A1P02452 1464 aaPredicted RBP18.09■□□□□ 0.49
CNP-201ENST00000393888 GMNCA6NCL1 334 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 KIF5BP33176 963 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 NEDD9Q14511 834 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 UAP1Q16222 522 aaPredicted RBP18.09■□□□□ 0.49
CNP-201ENST00000393888 FAM228AQ86W67 206 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 DHX37Q8IY37 1157 aaKnown RBP18.09■□□□□ 0.49
CNP-201ENST00000393888 WHAMMQ8TF30 809 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 NEUROG2Q9H2A3 272 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 LRRC4CQ9HCJ2 640 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 CNOT8Q9UFF9 292 aaKnown RBP18.09■□□□□ 0.49
CNP-201ENST00000393888 JAG2Q9Y219 1238 aa18.09■□□□□ 0.49
CNP-201ENST00000393888 MYMKA6NI61 221 aa18.08■□□□□ 0.49
CNP-201ENST00000393888 DCDC2CA8MYV0 355 aa18.08■□□□□ 0.49
CNP-201ENST00000393888 GCOM1H8Y6P7 765 aaPredicted RBP18.08■□□□□ 0.49
CNP-201ENST00000393888 OPLAHO14841 1288 aa18.08■□□□□ 0.49
CNP-201ENST00000393888 MYZAPP0CAP1 466 aa18.08■□□□□ 0.49
CNP-201ENST00000393888 FLT3P36888 993 aa18.08■□□□□ 0.49
CNP-201ENST00000393888 PREPLQ4J6C6 727 aaPredicted RBP18.08■□□□□ 0.49
CNP-201ENST00000393888 EMC10Q5UCC4 262 aa18.08■□□□□ 0.49
CNP-201ENST00000393888 CCDC84Q86UT8 332 aaPredicted RBP18.08■□□□□ 0.49
CNP-201ENST00000393888 RNF10Q8N5U6 811 aaKnown RBP18.08■□□□□ 0.49
CNP-201ENST00000393888 BANK1Q8NDB2 785 aa18.08■□□□□ 0.49
CNP-201ENST00000393888 AP1M1Q9BXS5 423 aa18.08■□□□□ 0.49
CNP-201ENST00000393888 ODF2LQ9ULJ1 636 aa18.08■□□□□ 0.49
CNP-201ENST00000393888 CYTH3O43739 400 aa18.08■□□□□ 0.48
CNP-201ENST00000393888 OR52Z1P0C646 297 aa18.08■□□□□ 0.48
CNP-201ENST00000393888 ELF1P32519 619 aa18.08■□□□□ 0.48
CNP-201ENST00000393888 CTNNA1P35221 906 aaKnown RBP18.08■□□□□ 0.48
CNP-201ENST00000393888 HSPA9P38646 679 aaKnown RBP18.08■□□□□ 0.48
CNP-201ENST00000393888 POLR2FP61218 127 aaKnown RBP18.08■□□□□ 0.48
CNP-201ENST00000393888 MEI1Q5TIA1 1274 aa18.08■□□□□ 0.48
CNP-201ENST00000393888 PPP4R3AQ6IN85 833 aa18.08■□□□□ 0.48
CNP-201ENST00000393888 PNMA1Q8ND90 353 aa18.08■□□□□ 0.48
CNP-201ENST00000393888 INPP4AQ96PE3 977 aaPredicted RBP18.08■□□□□ 0.48
CNP-201ENST00000393888 MMTAG2Q9BU76 263 aaKnown RBP18.08■□□□□ 0.48
CNP-201ENST00000393888 TOGARAM1Q9Y4F4 1720 aa18.08■□□□□ 0.48
CNP-201ENST00000393888 FRMD3A2A2Y4 597 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 KCNK3O14649 394 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 NF2P35240 595 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 TXKP42681 527 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 TFAP4Q01664 338 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 KIAA0753Q2KHM9 967 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 CYB5D1Q6P9G0 228 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 PARP9Q8IXQ6 854 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 KIRREL3Q8IZU9 778 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 TAF1DQ9H5J8 278 aaPredicted RBP18.07■□□□□ 0.48
CNP-201ENST00000393888 DCP1AQ9NPI6 582 aaPredicted RBP18.07■□□□□ 0.48
CNP-201ENST00000393888 BTG4Q9NY30 223 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 ADAMTS1Q9UHI8 967 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 DLEC1Q9Y238 1755 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.07■□□□□ 0.48
CNP-201ENST00000393888 ECHS1P30084 290 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 NAB2Q15742 525 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 SLC9C1Q4G0N8 1177 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 FUKQ8N0W3 1084 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 USP38Q8NB14 1042 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 UBLCP1Q8WVY7 318 aaPredicted RBP18.07■□□□□ 0.48
CNP-201ENST00000393888 IL17RBQ9NRM6 502 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 TSKSQ9UJT2 592 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 NOVA2Q9UNW9 492 aaKnown RBP18.07■□□□□ 0.48
CNP-201ENST00000393888 LEMD3Q9Y2U8 911 aa18.07■□□□□ 0.48
CNP-201ENST00000393888 A0A087X0T9 212 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 USP17L3A6NCW0 530 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 USP17L4A6NCW7 530 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 PHF20L1A8MW92 1017 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 ORC4O43929 436 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 FAM228BP0C875 321 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 ZNF844Q08AG5 666 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 SNCBQ16143 134 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 SFMBT2Q5VUG0 894 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 USP17L1Q7RTZ2 530 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 SEC16BQ96JE7 1060 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 RNF14Q9UBS8 474 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 LRP5O75197 1615 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 GRID2IPA4D2P6 1211 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 H0YGN5 161 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 STXBP3O00186 592 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 NOL4O94818 638 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 USP17L8P0C7I0 530 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 RAPGEF1Q13905 1077 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 ANKRD20A8PQ5CZ79 823 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 FAM83BQ5T0W9 1011 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 TMED8Q6PL24 325 aaPredicted RBP18.06■□□□□ 0.48
CNP-201ENST00000393888 DYNLL2Q96FJ2 89 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 LSM14BQ9BX40 385 aaKnown RBP18.06■□□□□ 0.48
CNP-201ENST00000393888 CUEDC2Q9H467 287 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 PLCB1Q9NQ66 1216 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 MAD2L2Q9UI95 211 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 NFS1Q9Y697 457 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 COL4A1P02462 1669 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 CACNA1SQ13698 1873 aa18.06■□□□□ 0.48
CNP-201ENST00000393888 ANKRD36CQ5JPF3 1778 aa18.05■□□□□ 0.48
CNP-201ENST00000393888 EVA1CP58658 441 aa18.05■□□□□ 0.48
CNP-201ENST00000393888 AMPD3Q01432 767 aa18.05■□□□□ 0.48
CNP-201ENST00000393888 BYSLQ13895 437 aaKnown RBP18.05■□□□□ 0.48
CNP-201ENST00000393888 CCDC152Q4G0S7 254 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms