RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CHRNDQ07001 517 aa17.99■□□□□ 0.47
PHTF1-205ENST00000393357 OTUD6AQ7L8S5 288 aa17.99■□□□□ 0.47
PHTF1-205ENST00000393357 FAM228AQ86W67 206 aa17.99■□□□□ 0.47
PHTF1-205ENST00000393357 CCDC25Q86WR0 208 aa17.99■□□□□ 0.47
PHTF1-205ENST00000393357 FAM114A1Q8IWE2 563 aa17.99■□□□□ 0.47
PHTF1-205ENST00000393357 ELAC2Q9BQ52 826 aaKnown RBP17.99■□□□□ 0.47
PHTF1-205ENST00000393357 FOXO6A8MYZ6 492 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 TTI1O43156 1089 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 ABCB4P21439 1286 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 KCNQ4P56696 695 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 MICAL1Q8TDZ2 1067 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 FER1L4A9Z1Z3 1794 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 KRIT1O00522 736 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 RPS6KA1Q15418 735 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 SLC9C1Q4G0N8 1177 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 DAAM2Q86T65 1068 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 C4AP0C0L4 1744 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 C4BP0C0L5 1744 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 RHOBTB3O94955 611 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 GNAT2P19087 354 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 KLRK1P26718 216 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 SCTRP47872 440 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 ZNF211Q13398 564 aaPredicted RBP17.98■□□□□ 0.47
PHTF1-205ENST00000393357 SFMBT2Q5VUG0 894 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 PIGBQ92521 554 aa17.98■□□□□ 0.47
PHTF1-205ENST00000393357 PRCCQ92733 491 aaPredicted RBP17.98■□□□□ 0.47
PHTF1-205ENST00000393357 GCKP35557 465 aa17.97■□□□□ 0.47
PHTF1-205ENST00000393357 SUSD4Q5VX71 490 aa17.97■□□□□ 0.47
PHTF1-205ENST00000393357 MIEF2Q96C03 454 aa17.97■□□□□ 0.47
PHTF1-205ENST00000393357 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
PHTF1-205ENST00000393357 NPHP3-ACAD11A0A0J9YXS1 232 aa17.97■□□□□ 0.47
PHTF1-205ENST00000393357 SMTNP53814 917 aa17.97■□□□□ 0.47
PHTF1-205ENST00000393357 PFKFB3Q16875 520 aaPredicted RBP17.97■□□□□ 0.47
PHTF1-205ENST00000393357 DCAF17Q5H9S7 520 aaPredicted RBP17.97■□□□□ 0.47
PHTF1-205ENST00000393357 SPAG5Q96R06 1193 aa17.97■□□□□ 0.47
PHTF1-205ENST00000393357 NUDT12Q9BQG2 462 aa17.97■□□□□ 0.47
PHTF1-205ENST00000393357 DNAJC17Q9NVM6 304 aaKnown RBP17.97■□□□□ 0.47
PHTF1-205ENST00000393357 MAP3K15Q6ZN16 1313 aa17.97■□□□□ 0.47
PHTF1-205ENST00000393357 SART1O43290 800 aaKnown RBP17.96■□□□□ 0.47
PHTF1-205ENST00000393357 KIF4AO95239 1232 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 PRDX5P30044 214 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 FAM83BQ5T0W9 1011 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 GKAP1Q5VSY0 366 aaPredicted RBP17.96■□□□□ 0.47
PHTF1-205ENST00000393357 LRCH2Q5VUJ6 765 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 ZNF526Q8TF50 670 aaPredicted RBP17.96■□□□□ 0.47
PHTF1-205ENST00000393357 DHTKD1Q96HY7 919 aaPredicted RBP17.96■□□□□ 0.47
PHTF1-205ENST00000393357 THRAP3Q9Y2W1 955 aaKnown RBP17.96■□□□□ 0.47
PHTF1-205ENST00000393357 MYMKA6NI61 221 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 TNNC1P63316 161 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 ZNF844Q08AG5 666 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 ZKSCAN8Q15776 578 aaPredicted RBP17.96■□□□□ 0.47
PHTF1-205ENST00000393357 CALML4Q96GE6 196 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 PCDHA6Q9UN73 950 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 PCDHA8Q9Y5H6 950 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 TMEM110-MUSTN1A8MSY1 372 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 TRIM68Q6AZZ1 485 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 USP17L2Q6R6M4 530 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 RETREG2Q8NC44 543 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 PURBQ96QR8 312 aaKnown RBP17.96■□□□□ 0.47
PHTF1-205ENST00000393357 FGFBP2Q9BYJ0 223 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 ARPP21Q9UBL0 812 aaPredicted RBP17.96■□□□□ 0.47
PHTF1-205ENST00000393357 PCDHA4Q9UN74 947 aa17.96■□□□□ 0.47
PHTF1-205ENST00000393357 MYH6P13533 1939 aa17.96■□□□□ 0.46
PHTF1-205ENST00000393357 MARF1Q9Y4F3 1742 aaKnown RBP17.95■□□□□ 0.46
PHTF1-205ENST00000393357 UAP1Q16222 522 aaPredicted RBP17.95■□□□□ 0.46
PHTF1-205ENST00000393357 ANKRD20A8PQ5CZ79 823 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 SV2BQ7L1I2 683 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 SLC51AQ86UW1 340 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 C4orf32Q8N8J7 132 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 MTFR1LQ9H019 292 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 MCM8Q9UJA3 840 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 SOGA3Q5TF21 947 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 NSMCE1Q8WV22 266 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 DYDC1Q8WWB3 177 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 CAVIN3Q969G5 261 aa17.95■□□□□ 0.46
PHTF1-205ENST00000393357 TLR2O60603 784 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 KRT18P05783 430 aaKnown RBP17.94■□□□□ 0.46
PHTF1-205ENST00000393357 UBAP2Q5T6F2 1119 aaKnown RBP17.94■□□□□ 0.46
PHTF1-205ENST00000393357 SPDL1Q96EA4 605 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 TAF1DQ9H5J8 278 aaPredicted RBP17.94■□□□□ 0.46
PHTF1-205ENST00000393357 KBTBD4Q9NVX7 518 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 KRT13P13646 458 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 PLTPP55058 493 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 GJB7Q6PEY0 223 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 TRMT1LQ7Z2T5 733 aaKnown RBP17.94■□□□□ 0.46
PHTF1-205ENST00000393357 GLG1Q92896 1179 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 TMBIM4Q9HC24 238 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 SIK3Q9Y2K2 1263 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 A8MUI8 341 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 HMGB1P1B2RPK0 211 aaPredicted RBP17.94■□□□□ 0.46
PHTF1-205ENST00000393357 CAND2O75155 1236 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 RASSF9O75901 435 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 SHBGP04278 402 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 TNNI2P48788 182 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 TBCKQ8TEA7 893 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 SGSM3Q96HU1 749 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 NR2E1Q9Y466 385 aa17.94■□□□□ 0.46
PHTF1-205ENST00000393357 SMCO2A6NFE2 343 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms