RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 PAK2Q13177 524 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 NAALADL2Q58DX5 795 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 WDR59Q6PJI9 974 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 POTEGQ6S5H5 508 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 POTEEQ6S8J3 1075 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 GIMAP8Q8ND71 665 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PPM1EQ8WY54 764 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ARL8AQ96BM9 186 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 KCND1Q9NSA2 647 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ARMCX3Q9UH62 379 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 USP17L10C9JJH3 530 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 STXBP3O00186 592 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 GDF11O95390 407 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 VPS41P49754 854 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 FAM83BQ5T0W9 1011 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 LRRC31Q6UY01 552 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CCNI2Q6ZMN8 369 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SH3RF1Q7Z6J0 888 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 MYCT1Q8N699 235 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 MGARPQ8TDB4 240 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CHORDC1Q9UHD1 332 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SNX12Q9UMY4 172 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 MST1RQ04912 1400 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SEC24CP53992 1094 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 FBXW10Q5XX13 1052 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 TRAPPC11Q7Z392 1133 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PHLDB2Q86SQ0 1253 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CCDC170Q8IYT3 715 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PIGOQ8TEQ8 1089 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ARHGAP20Q9P2F6 1191 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 COL4A3BPQ9Y5P4 624 aa15.82■□□□□ 0.12
TNFRSF1B-201ENST00000376259 GFPT2O94808 682 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 TMED8Q6PL24 325 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 APTXQ7Z2E3 356 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CUL5Q93034 780 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 RPGRIP1Q96KN7 1286 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SEMA6BQ9H3T3 888 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PPFIA4O75335 1185 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 RHOBTB3O94955 611 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 FUT2Q10981 343 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 RCSD1Q6JBY9 416 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 LINC00116Q8NCU8 138 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 DUSP9Q99956 384 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PAIP2Q9BPZ3 127 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PACSIN1Q9BY11 444 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 MAD2L2Q9UI95 211 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ORC4O43929 436 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 AKR1B1P15121 316 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SLCO1A2P46721 670 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 IFNAR2P48551 515 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 GRM4Q14833 912 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SLF2Q8IX21 1173 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 EMILIN3Q9NT22 766 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 FAM169AQ9Y6X4 670 aa15.81■□□□□ 0.12
TNFRSF1B-201ENST00000376259 GSTTP1A0A1W2PQM5 241 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 XRCC5P13010 732 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 MSANTD4Q8NCY6 345 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 UBAP1LF5GYI3 381 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 RASA1P20936 1047 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 COPB2P35606 906 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CCDC174Q6PII3 467 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 LRRC27Q9C0I9 530 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 THRAP3Q9Y2W1 955 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ITIH6Q6UXX5 1313 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SORBS3O60504 671 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 KLRC1P26715 233 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CCDC121Q6ZUS5 278 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PLCD4Q9BRC7 762 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 DNAJC17Q9NVM6 304 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 DNM3Q9UQ16 869 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ATP8A1Q9Y2Q0 1164 aa15.8■□□□□ 0.12
TNFRSF1B-201ENST00000376259 NALCNQ8IZF0 1738 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PLA2G4BP0C869 781 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ZNF211Q13398 564 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ERMNQ8TAM6 284 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ZNF384Q8TF68 577 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 GCOM1H8Y6P7 765 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 MYZAPP0CAP1 466 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PCP11498 1178 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 EPHB4P54760 987 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 RETREG2Q8NC44 543 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 KIAA0895Q8NCT3 520 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CABS1Q96KC9 395 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PSMD14O00487 310 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 MAP2K7O14733 419 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 COASYQ13057 564 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 EXOC3L4Q17RC7 722 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 KCNK18Q7Z418 384 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 MTMR8Q96EF0 704 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 AK8Q96MA6 479 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CCSER1Q9C0I3 900 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 BHMT2Q9H2M3 363 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 DBNDD1Q9H9R9 158 aa15.79■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CAMTA1Q9Y6Y1 1673 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PDS5AQ29RF7 1337 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 A0A1W2PQC6 194 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 VIMP08670 466 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PLCG2P16885 1265 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 GJB7Q6PEY0 223 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms