RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 TCP10L2B9ZVM9 353 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 COBLO75128 1261 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 SHMT1P34896 483 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 CLK2P49760 499 aaKnown RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 GMPSP49915 693 aaPredicted RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 ATP2B2Q01814 1243 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 SPA17Q15506 151 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 MAN2A1Q16706 1144 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 HAUS3Q68CZ6 603 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 ZFPM1Q8IX07 1006 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 SLC35F6Q8N357 371 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 ERMNQ8TAM6 284 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 FAM151AQ8WW52 585 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 MKL1Q969V6 931 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 MTMR8Q96EF0 704 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 SLF1Q9BQI6 1058 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 MMTAG2Q9BU76 263 aaKnown RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 NUCKS1Q9H1E3 243 aaKnown RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 TMEM260Q9NX78 707 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 EIF3CLB5ME19 914 aaKnown RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 PRELPP51888 382 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 PMS1P54277 932 aaKnown RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 STK4Q13043 487 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 TNFAIP1Q13829 316 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 MCM6Q14566 821 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 HYIQ5T013 277 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 FAM83AQ86UY5 434 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 ACRBPQ8NEB7 543 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 ZBED3Q96IU2 234 aaPredicted RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 CSRNP1Q96S65 589 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 EIF3CQ99613 913 aaKnown RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 ACBD3Q9H3P7 528 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 LUC7LQ9NQ29 371 aaKnown RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 HERC5Q9UII4 1024 aaKnown RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 SYNPO2Q9UMS6 1093 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 PCDHA12Q9UN75 941 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 ZNF541Q9H0D2 1346 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 WNT10BO00744 389 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 EIF3JO75822 258 aaKnown RBP13.58□□□□□ -0.24
UBR4-203ENST00000375225 ZRANB2O95218 330 aaKnown RBP eCLIP13.58□□□□□ -0.24
UBR4-203ENST00000375225 TDP2O95551 362 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 FOSP01100 380 aaPredicted RBP13.58□□□□□ -0.24
UBR4-203ENST00000375225 PNMA6AP0CW24 399 aaPredicted RBP13.58□□□□□ -0.24
UBR4-203ENST00000375225 IDEP14735 1019 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 ZSCAN20P17040 1043 aaPredicted RBP13.58□□□□□ -0.24
UBR4-203ENST00000375225 SLC1A4P43007 532 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 CERKLQ49MI3 558 aaPredicted RBP13.58□□□□□ -0.24
UBR4-203ENST00000375225 VWA3BQ502W6 1294 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 TMEM179Q6ZVK1 233 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 SH3BP5LQ7L8J4 393 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 MYOCDQ8IZQ8 938 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 KCTD17Q8N5Z5 321 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
UBR4-203ENST00000375225 JAKMIP2Q96AA8 810 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 MYO6Q9UM54 1294 aa13.58□□□□□ -0.24
UBR4-203ENST00000375225 ANO9A1A5B4 782 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 MYMKA6NI61 221 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 TBX3O15119 743 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 SLC37A4O43826 429 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 KIF5AQ12840 1032 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 CCDC122Q5T0U0 273 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 CCDC70Q6NSX1 233 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 GPC2Q8N158 579 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 LRRN4CLQ8ND94 238 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 CCDC42Q96M95 316 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 CEP63Q96MT8 703 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 PNMA5Q96PV4 448 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 ZMYND15Q9H091 742 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 SLC39A2Q9NP94 309 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 BLOC1S4Q9NUP1 217 aa13.57□□□□□ -0.24
UBR4-203ENST00000375225 CNOT7Q9UIV1 285 aaKnown RBP13.57□□□□□ -0.24
UBR4-203ENST00000375225 FANCGO15287 622 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 FCER1AP12319 257 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 ARHGAP25P42331 645 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 FKBP3Q00688 224 aaKnown RBP13.56□□□□□ -0.24
UBR4-203ENST00000375225 SLFN13Q68D06 897 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 CC2D1AQ6P1N0 951 aaPredicted RBP13.56□□□□□ -0.24
UBR4-203ENST00000375225 ZNF771Q7L3S4 317 aaPredicted RBP13.56□□□□□ -0.24
UBR4-203ENST00000375225 KIAA0895Q8NCT3 520 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 DDX12PQ92771 950 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 AMNQ9BXJ7 453 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 PARD6BQ9BYG5 372 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 TTYH3Q9C0H2 523 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 NDST4Q9H3R1 872 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 DEF6Q9H4E7 631 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 NHEJ1Q9H9Q4 299 aaPredicted RBP13.56□□□□□ -0.24
UBR4-203ENST00000375225 GUCA1BQ9UMX6 200 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 FHOD1Q9Y613 1164 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 CNTNAP1P78357 1384 aa13.56□□□□□ -0.24
UBR4-203ENST00000375225 CYP3A7-CYP3A51PA0A087WV96 503 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 CYP3A7P24462 503 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 HNRNPH3P31942 346 aaKnown RBP13.55□□□□□ -0.24
UBR4-203ENST00000375225 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 MAP9Q49MG5 647 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 RBM26Q5T8P6 1007 aaKnown RBP13.55□□□□□ -0.24
UBR4-203ENST00000375225 TATDN1Q6P1N9 297 aa13.55□□□□□ -0.24
UBR4-203ENST00000375225 MSL3Q8N5Y2 521 aaKnown RBP13.55□□□□□ -0.24
UBR4-203ENST00000375225 MSANTD4Q8NCY6 345 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms