RNA–Protein interactions for RNA: ENST00000372405.1

PTPRF-202, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-202ENST00000372405 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 LCTP09848 1927 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 EML1O00423 815 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 COBLO75128 1261 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 PSMD10O75832 226 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 OAZ1P54368 228 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 TPM4P67936 248 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 NCAPH2Q6IBW4 605 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 SNRNP48Q6IEG0 339 aaKnown RBP15.45■□□□□ 0.06
PTPRF-202ENST00000372405 CATSPER3Q86XQ3 398 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 SLC5A5Q92911 643 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 TAAR1Q96RJ0 339 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 KIAA1024Q9UPX6 916 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 CTNND2Q9UQB3 1225 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 MAPK8IP1Q9UQF2 711 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 ZKSCAN5Q9Y2L8 839 aa15.45■□□□□ 0.06
PTPRF-202ENST00000372405 KDM3AQ9Y4C1 1321 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 E9PMD0 336 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 ATP2A1O14983 1001 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 ASIC1P78348 528 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 MRPS9P82933 396 aaKnown RBP15.44■□□□□ 0.06
PTPRF-202ENST00000372405 OTOP1Q7RTM1 612 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 ADSSL1Q8N142 457 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 GIMAP8Q8ND71 665 aaPredicted RBP15.44■□□□□ 0.06
PTPRF-202ENST00000372405 OTUD5Q96G74 571 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 NT5C3AQ9H0P0 336 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 KCNF1Q9H3M0 494 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 MAP3K20Q9NYL2 800 aaKnown RBP15.44■□□□□ 0.06
PTPRF-202ENST00000372405 PNMA2Q9UL42 364 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 MYPNQ86TC9 1320 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 POTEFA5A3E0 1075 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 AMPD3Q01432 767 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 SPATA1Q5VX52 437 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 CNNM4Q6P4Q7 775 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 POTEGQ6S5H5 508 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 ANKRD13AQ8IZ07 590 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 FAM43AQ8N2R8 423 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 SAMD3Q8N6K7 520 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 MXRA8Q9BRK3 442 aa15.44■□□□□ 0.06
PTPRF-202ENST00000372405 A0A0G2JLL6 359 aaPredicted RBP15.43■□□□□ 0.06
PTPRF-202ENST00000372405 IQCA1LA6NCM1 817 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 SPDYE5A6NIY4 337 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 SLC26A4O43511 780 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 PEX10O60683 326 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 FCER1AP12319 257 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 PTGS1P23219 599 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 RPA1P27694 616 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 NF2P35240 595 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 PSMC6P62333 389 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 PPATQ06203 517 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 STK4Q13043 487 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 SEMA3FQ13275 785 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 BAATQ14032 418 aaPredicted RBP15.43■□□□□ 0.06
PTPRF-202ENST00000372405 LRCH2Q5VUJ6 765 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 PCNX4Q63HM2 1172 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 NSMFQ6X4W1 530 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 RNF207Q6ZRF8 634 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 DYMQ7RTS9 669 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 CCDC186Q7Z3E2 898 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 PRRT2Q7Z6L0 340 aaPredicted RBP15.43■□□□□ 0.06
PTPRF-202ENST00000372405 ERO1BQ86YB8 467 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 DRC7Q8IY82 874 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 HPS3Q969F9 1004 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 NAP1L5Q96NT1 182 aaPredicted RBP15.43■□□□□ 0.06
PTPRF-202ENST00000372405 INTS13Q9NVM9 706 aa15.43■□□□□ 0.06
PTPRF-202ENST00000372405 EIF2AK2P19525 551 aaKnown RBP15.42■□□□□ 0.06
PTPRF-202ENST00000372405 PDE4DQ08499 809 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 PPP2R5CQ13362 524 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 PGM5Q15124 567 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 CDKAL1Q5VV42 579 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 HAUS3Q68CZ6 603 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 B3GNT9Q6UX72 402 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 NELFBQ8WX92 580 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 DDX12PQ92771 950 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 DNAJC19Q96DA6 116 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 TEX13BQ9BXU2 312 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 WDR11Q9BZH6 1224 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 HOXC10Q9NYD6 342 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 RWDD2AQ9UIY3 292 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 RABGAP1Q9Y3P9 1069 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 UBIAD1Q9Y5Z9 338 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 BCRP11274 1271 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 PMS1P54277 932 aaKnown RBP15.42■□□□□ 0.06
PTPRF-202ENST00000372405 SETQ01105 290 aaPredicted RBP15.42■□□□□ 0.06
PTPRF-202ENST00000372405 EHHADHQ08426 723 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 PAK1Q13153 545 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 TTLL12Q14166 644 aaPredicted RBP15.42■□□□□ 0.06
PTPRF-202ENST00000372405 APTXQ7Z2E3 356 aaKnown RBP15.42■□□□□ 0.06
PTPRF-202ENST00000372405 KIAA0895Q8NCT3 520 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 EIF2AK1Q9BQI3 630 aaKnown RBP15.42■□□□□ 0.06
PTPRF-202ENST00000372405 ZNF577Q9BSK1 485 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 PXMP2Q9NR77 195 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 EXOC1Q9NV70 894 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 RGL1Q9NZL6 768 aa15.42■□□□□ 0.06
PTPRF-202ENST00000372405 GOLGA6L6A8MZA4 724 aa15.41■□□□□ 0.06
PTPRF-202ENST00000372405 IPO5O00410 1097 aaKnown RBP15.41■□□□□ 0.06
PTPRF-202ENST00000372405 PLA2G4BP0C869 781 aa15.41■□□□□ 0.06
PTPRF-202ENST00000372405 UBASH3AP57075 661 aa15.41■□□□□ 0.06
PTPRF-202ENST00000372405 CYP4A11Q02928 519 aa15.41■□□□□ 0.06
PTPRF-202ENST00000372405 MOGSQ13724 837 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms