RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 IKZF1Q13422 519 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 PLCL1Q15111 1095 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 NBPF9Q3BBW0 867 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 ANGEL2Q5VTE6 544 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 CLEC4GQ6UXB4 293 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 UNC5AQ6ZN44 842 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 LRP10Q7Z4F1 713 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 SDR16C5Q8N3Y7 309 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 ZNF512BQ96KM6 892 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 DEPDC7Q96QD5 511 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 CHMP4BQ9H444 224 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 PRDM7Q9NQW5 492 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 ST7Q9NRC1 585 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 MBNL3Q9NUK0 354 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 KCNH3Q9ULD8 1083 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 MRPL42Q9Y6G3 142 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 PPLO60437 1756 aa6.36□□□□□ -1.39
ECHDC1-204ENST00000368292 KCPQ6ZWJ8 1503 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 PXDNLA1KZ92 1463 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 A0A1W2PQH9 124 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 FAM86C2PA6NEL3 165 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 CCDC85CA6NKD9 419 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 U2SURPO15042 1029 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 CLEC3AO75596 197 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 ESR1P03372 595 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 RNASE1P07998 156 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 RNF4P78317 190 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 ZP2Q05996 745 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 DDR2Q16832 855 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 ZNF792Q3KQV3 632 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 TSPYL5Q86VY4 417 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 C19orf47Q8N9M1 422 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 CCDC113Q9H0I3 377 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 LMCD1Q9NZU5 365 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 FAN1Q9Y2M0 1017 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 THRAP3Q9Y2W1 955 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 KIAA1551Q9HCM1 1747 aa6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 TNRC6CQ9HCJ0 1690 aaKnown RBP6.35□□□□□ -1.39
ECHDC1-204ENST00000368292 KIF1BO60333 1816 aa6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 LTBP3Q9NS15 1303 aa6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 C9IYK1 514 aa6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 TPP2P29144 1249 aaPredicted RBP6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 LBX1P52954 281 aa6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 SNW1Q13573 536 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 PTPROQ16827 1216 aa6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 CASC1Q6TDU7 716 aa6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 TTC6Q86TZ1 520 aa6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 PPFIBP1Q86W92 1011 aa6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 RNPC3Q96LT9 517 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 CARS2Q9HA77 564 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 SUCOQ9UBS9 1254 aaKnown RBP6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 CD2APQ9Y5K6 639 aa6.34□□□□□ -1.39
ECHDC1-204ENST00000368292 VIRMAQ69YN4 1812 aaKnown RBP6.34□□□□□ -1.4
ECHDC1-204ENST00000368292 IGSF1Q8N6C5 1336 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 TTC36A6NLP5 189 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 EVA1CP58658 441 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 TCEAL1Q15170 157 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 DDB1Q16531 1140 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 PPP2R5EQ16537 467 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 EGFLAMQ63HQ2 1017 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 LARP1BQ659C4 914 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 SLC23A3Q6PIS1 610 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 TMPRSS7Q7RTY8 843 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 TMC3Q7Z5M5 1100 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 PI4K2BQ8TCG2 481 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 TRIT1Q9H3H1 467 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 JADE2Q9NQC1 790 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 GPATCH2Q9NW75 528 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 STK26Q9P289 416 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 CHPF2Q9P2E5 772 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 COMMD10Q9Y6G5 202 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 CRB1P82279 1406 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 PIK3C2AO00443 1686 aa6.33□□□□□ -1.4
ECHDC1-204ENST00000368292 TRPM1Q7Z4N2 1603 aa6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 B2RBV5 119 aa6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 SHOXO15266 292 aa6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 NRDCO43847 1150 aa6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 IBSPP21815 317 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 CTCFP49711 727 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 PMS1P54277 932 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 CHMP4BP1P59074 171 aa6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 NMIQ13287 307 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 FXNQ16595 210 aa6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 C16orf71Q8IYS4 520 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 LRRN4CLQ8ND94 238 aa6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 PNISRQ8TF01 805 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 DHRS1Q96LJ7 313 aa6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 PRDM14Q9GZV8 571 aa6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 ZNF214Q9UL59 606 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-204ENST00000368292 ABCC11Q96J66 1382 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 PDPK1O15530 556 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 WDHD1O75717 1129 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 GJB6O95452 261 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 HSPA8P11142 646 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 IRAK1P51617 712 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 AUHQ13825 339 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 RASGRF1Q13972 1273 aa6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 AXDND1Q5T1B0 1012 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 TDRD10Q5VZ19 366 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-204ENST00000368292 CREG2Q8IUH2 290 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms