RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 GAS8O95995 478 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 EPHB4P54760 987 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 UAP1Q16222 522 aaPredicted RBP17.88■□□□□ 0.45
SCAF1-201ENST00000360565 C12orf60Q5U649 245 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 CC2D2BQ6DHV5 1058 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 CNKSR1Q969H4 720 aa17.88■□□□□ 0.45
SCAF1-201ENST00000360565 DHX36Q9H2U1 1008 aaKnown RBP17.88■□□□□ 0.45
SCAF1-201ENST00000360565 FAM196BA6NMK8 535 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 PRPF6O94906 941 aaKnown RBP17.87■□□□□ 0.45
SCAF1-201ENST00000360565 PSMC2P35998 433 aaKnown RBP17.87■□□□□ 0.45
SCAF1-201ENST00000360565 RGS16O15492 202 aaPredicted RBP17.87■□□□□ 0.45
SCAF1-201ENST00000360565 FERP16591 822 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 POLD1P28340 1107 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 ZNF577Q9BSK1 485 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 COA1Q9GZY4 146 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 NF2P35240 595 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 SEPT2Q15019 361 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 CLUL1Q15846 466 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 KRT26Q7Z3Y9 468 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 PXDNQ92626 1479 aa17.87■□□□□ 0.45
SCAF1-201ENST00000360565 GFPT2O94808 682 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 CCT5P48643 541 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 CCDC6Q16204 474 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 PPP2R5EQ16537 467 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 OTUD6AQ7L8S5 288 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 CROCCP2Q86T23 111 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 POLD4Q9HCU8 107 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 GCNT4Q9P109 453 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 A0A1B0GTH6 734 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 SORBS3O60504 671 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 SERPING1P05155 500 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 ATP2A2P16615 1042 aaKnown RBP17.86■□□□□ 0.45
SCAF1-201ENST00000360565 ARHGAP25P42331 645 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 SETDB1Q15047 1291 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 TMED8Q6PL24 325 aaPredicted RBP17.86■□□□□ 0.45
SCAF1-201ENST00000360565 FLAD1Q8NFF5 587 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 EXOC4Q96A65 974 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 TADA3O75528 432 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 KCNJ6P48051 423 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 NKX1-1Q15270 411 aaPredicted RBP17.86■□□□□ 0.45
SCAF1-201ENST00000360565 ARHGEF16Q5VV41 709 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 RBM43Q6ZSC3 357 aaKnown RBP17.86■□□□□ 0.45
SCAF1-201ENST00000360565 GINS2Q9Y248 185 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 N4BP1O75113 896 aaKnown RBP17.86■□□□□ 0.45
SCAF1-201ENST00000360565 MESDQ14696 234 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 SF3B3Q15393 1217 aaKnown RBP17.86■□□□□ 0.45
SCAF1-201ENST00000360565 CCDC63Q8NA47 563 aa17.86■□□□□ 0.45
SCAF1-201ENST00000360565 TDP2O95551 362 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 FCER1AP12319 257 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 MYL7Q01449 175 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 LLGL1Q15334 1064 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 SYDE2Q5VT97 1194 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 TAOK1Q7L7X3 1001 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 NEDD1Q8NHV4 660 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 ADAM21Q9UKJ8 722 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 SFI1A8K8P3 1242 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 E9PMD0 336 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 NOP56O00567 594 aaKnown RBP17.85■□□□□ 0.45
SCAF1-201ENST00000360565 GAP43P17677 238 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 FXR1P51114 621 aaKnown RBP eCLIP17.85■□□□□ 0.45
SCAF1-201ENST00000360565 ALKBH5Q6P6C2 394 aaKnown RBP17.85■□□□□ 0.45
SCAF1-201ENST00000360565 MAK16Q9BXY0 300 aaKnown RBP17.85■□□□□ 0.45
SCAF1-201ENST00000360565 QTRT2Q9H974 415 aaKnown RBP17.85■□□□□ 0.45
SCAF1-201ENST00000360565 HDAC6Q9UBN7 1215 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 ADD3Q9UEY8 706 aaKnown RBP17.85■□□□□ 0.45
SCAF1-201ENST00000360565 TRPC5Q9UL62 973 aaPredicted RBP17.85■□□□□ 0.45
SCAF1-201ENST00000360565 PVALEFA0A1B0GWK0 134 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 ZBTB5O15062 677 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 PPFIA4O75335 1185 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 C6orf163Q5TEZ5 329 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 TC2NQ8N9U0 490 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 CHP1Q99653 195 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 FEZ2Q9UHY8 353 aaPredicted RBP17.85■□□□□ 0.45
SCAF1-201ENST00000360565 MRFAP1Q9Y605 127 aa17.85■□□□□ 0.45
SCAF1-201ENST00000360565 LMNB1P20700 586 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 CALRP27797 417 aaKnown RBP17.84■□□□□ 0.45
SCAF1-201ENST00000360565 MXRA7P84157 204 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 PTPAQ15257 358 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 MGARPQ8TDB4 240 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 PCIF1Q9H4Z3 704 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 LRRC53A6NM62 1247 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 USP17L10C9JJH3 530 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 IFNB1P01574 187 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 CASP7P55210 303 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 MEGF6O75095 1541 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 PGRMC1O00264 195 aaKnown RBP17.84■□□□□ 0.45
SCAF1-201ENST00000360565 INTS8Q75QN2 995 aaKnown RBP17.84■□□□□ 0.45
SCAF1-201ENST00000360565 DEPTORQ8TB45 409 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 NACC1Q96RE7 527 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 WDR11Q9BZH6 1224 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 RNF14Q9UBS8 474 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 NTSR2O95665 410 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 LIG3P49916 1009 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 STAT2P52630 851 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 DPYDQ12882 1025 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 PNMA8AQ86V59 439 aaPredicted RBP17.84■□□□□ 0.45
SCAF1-201ENST00000360565 HPS3Q969F9 1004 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 MAGOHBQ96A72 148 aaKnown RBP17.84■□□□□ 0.45
SCAF1-201ENST00000360565 PARP2Q9UGN5 583 aa17.84■□□□□ 0.45
SCAF1-201ENST00000360565 AGXT2Q9BYV1 514 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms