RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 ZNF76P36508 570 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 MTIF2P46199 727 aaKnown RBP20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 CYP26C1Q6V0L0 522 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 RETREG2Q8NC44 543 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 GJA10Q969M2 543 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 LENG9Q96B70 501 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 IQCDQ96DY2 449 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 SEMA6BQ9H3T3 888 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 L2HGDHQ9H9P8 463 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 ABHD10Q9NUJ1 306 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 PANK4Q9NVE7 773 aa20.38■□□□□ 0.85
PDLIM7-203ENST00000359895 GCOM1H8Y6P7 765 aaPredicted RBP20.37■□□□□ 0.85
PDLIM7-203ENST00000359895 POLR2MP0CAP2 368 aa20.37■□□□□ 0.85
PDLIM7-203ENST00000359895 ZNF280AP59817 542 aaPredicted RBP20.37■□□□□ 0.85
PDLIM7-203ENST00000359895 SPIRE1Q08AE8 756 aa20.37■□□□□ 0.85
PDLIM7-203ENST00000359895 COASYQ13057 564 aa20.37■□□□□ 0.85
PDLIM7-203ENST00000359895 NBPF9Q3BBW0 867 aa20.37■□□□□ 0.85
PDLIM7-203ENST00000359895 MIGA2Q7L4E1 593 aa20.37■□□□□ 0.85
PDLIM7-203ENST00000359895 PITPNM2Q9BZ72 1349 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 SOWAHDA6NJG2 315 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 PES1O00541 588 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 KIF20AO95235 890 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 SLU7O95391 586 aaKnown RBP20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 RPA1P27694 616 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 HOXA13P31271 388 aaPredicted RBP20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 MYOCDQ8IZQ8 938 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 HPS3Q969F9 1004 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 KIFC2Q96AC6 838 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 ERO1AQ96HE7 468 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 SYT17Q9BSW7 474 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 DNAI1Q9UI46 699 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 ADGRG1Q9Y653 693 aa20.36■□□□□ 0.85
PDLIM7-203ENST00000359895 POTEB3A0JP26 581 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 POTECB2RU33 542 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 E9PMD0 336 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 FAM86B1E9PN63 330 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 SSBP05455 408 aaKnown RBP eCLIP20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 FAM86B2P0C5J1 330 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 KRT9P35527 623 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 HSP90AA2PQ14568 343 aaPredicted RBP20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 TSR1Q2NL82 804 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 FAM26FQ5R3K3 315 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 FKBP15Q5T1M5 1219 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 NCAPH2Q6IBW4 605 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 CCDC174Q6PII3 467 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 POTEBQ6S5H4 581 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 RAD9BQ6WBX8 426 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 GPBP1Q86WP2 473 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 TSC1Q92574 1164 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 NOC4LQ9BVI4 516 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 CAPN11Q9UMQ6 739 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 LUC7L2Q9Y383 392 aaKnown RBP20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 LOXHD1Q8IVV2 1947 aa20.35■□□□□ 0.85
PDLIM7-203ENST00000359895 B4DLN1 442 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 MSH4O15457 936 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 MED24O75448 989 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 STAT3P40763 770 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 TBC1D8BQ0IIM8 1120 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 CDAN1Q8IWY9 1227 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 OR8K1Q8NGG5 319 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 ANKRD7Q92527 254 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 POLR3CQ9BUI4 534 aaPredicted RBP20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 PDCL3Q9H2J4 239 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 DNM3Q9UQ16 869 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 LTBP3Q9NS15 1303 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 CFBP00751 764 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 RASA3Q14644 834 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 MTF1Q14872 753 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 CATSPER3Q86XQ3 398 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 ERGIC2Q96RQ1 377 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 DEFB129Q9H1M3 183 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 RABGAP1Q9Y3P9 1069 aa20.34■□□□□ 0.85
PDLIM7-203ENST00000359895 RBBP6Q7Z6E9 1792 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-203ENST00000359895 CYP11B2P19099 503 aa20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 SLC12A3P55017 1021 aa20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 ZYXQ15942 572 aaKnown RBP20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 FIGNQ5HY92 759 aa20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 ZNF710Q8N1W2 664 aa20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 LPAR1Q92633 364 aa20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 DNAJC7Q99615 494 aa20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 FEZ1Q99689 392 aa20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 DESI2Q9BSY9 194 aa20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 VAV3Q9UKW4 847 aa20.33■□□□□ 0.84
PDLIM7-203ENST00000359895 IGLV3-22A0A075B6J6 115 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 TTC26A0AVF1 554 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 FRMD3A2A2Y4 597 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 PHF20L1A8MW92 1017 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 NFKBIEO00221 500 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 WDR46O15213 610 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 KRT18P05783 430 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 TAL1P17542 331 aaPredicted RBP20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 CASQ1P31415 396 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 MAN2A1Q16706 1144 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 KIF4BQ2VIQ3 1234 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 MIIPQ5JXC2 388 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 LDHDQ86WU2 507 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 SYT2Q8N9I0 419 aaPredicted RBP20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 DOCK1Q14185 1865 aa20.32■□□□□ 0.84
PDLIM7-203ENST00000359895 A0A1W2PQJ5 194 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms