RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ANKIB1Q9P2G1 1089 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 NFE2L3Q9Y4A8 694 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 KLF18A0A0U1RQI7 1052 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 BAG3O95817 575 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 ATF7P17544 494 aaPredicted RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 NCF2P19878 526 aaPredicted RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 CDC27P30260 824 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 LONRF3Q496Y0 759 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 IKBIPQ70UQ0 350 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 SYT2Q8N9I0 419 aaPredicted RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 LRRC39Q96DD0 335 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 ADNPQ9H2P0 1102 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 TDRD6O60522 2096 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 DOCK6Q96HP0 2047 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 SMAPO00193 183 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 LSM1O15116 133 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 PPIP5K2O43314 1243 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 EIF2S1P05198 315 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 SRGAP2BP0DMP2 458 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 ACTN3Q08043 901 aaPredicted RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 CCDC144BQ3MJ40 725 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 NAIF1Q69YI7 327 aaPredicted RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 OR8K1Q8NGG5 319 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 TGS1Q96RS0 853 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 ARHGEF3Q9NR81 526 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 NSD2O96028 1365 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 M0R3G1 203 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 BTNL9Q6UXG8 535 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 CROCCP3Q8IVE0 287 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 SIX6OS1Q8N1H7 587 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.64□□□□□ -1.35
VCAN-203ENST00000343200 PHF21AQ96BD5 680 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 PRPF18Q99633 342 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 PITPNM3Q9BZ71 974 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 L3MBTL1Q9Y468 752 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 NAPAP54920 295 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 TUBA1BP68363 451 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 ARMCX4Q5H9R4 360 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 KRT79Q5XKE5 535 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 HAUS3Q68CZ6 603 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 TUBA1AQ71U36 451 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 CAAP1Q9H8G2 361 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 GMNCA6NCL1 334 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 CUTAO60888 179 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 MLECQ14165 292 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 TMED2Q15363 201 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 EPM2AIP1Q7L775 607 aaPredicted RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 MFN1Q8IWA4 741 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 CDAN1Q8IWY9 1227 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 NEK9Q8TD19 979 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 VPS16Q9H269 839 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 SMYD2Q9NRG4 433 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 SEC31AO94979 1220 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 SCP2P22307 547 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 TBC1D9BQ66K14 1250 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 ABCA7Q8IZY2 2146 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 MTERF3Q96E29 417 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 CSRNP1Q96S65 589 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 MTA3Q9BTC8 594 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 LSG1Q9H089 658 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 CHMP2BQ9UQN3 213 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 APOBEC2Q9Y235 224 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 SYNJ1O43426 1573 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 PIK3R4Q99570 1358 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 GPC4O75487 556 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 NR5A1Q13285 461 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 TRIM25Q14258 630 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 MPRIPQ6WCQ1 1025 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 WBP11Q9Y2W2 641 aaKnown RBP6.64□□□□□ -1.35
VCAN-203ENST00000343200 SSH2Q76I76 1423 aa6.64□□□□□ -1.35
VCAN-203ENST00000343200 E7ENQ6 273 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 CAND2O75155 1236 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 AP1S2P56377 157 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 HDLBPQ00341 1268 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 OCRLQ01968 901 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 TMEM154Q6P9G4 183 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 STX12Q86Y82 276 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 NCLNQ969V3 563 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 NR1H4Q96RI1 486 aaPredicted RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 MOV10L1Q9BXT6 1211 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 ASPSCR1Q9BZE9 553 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 NDUFA13Q9P0J0 144 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 HEATR5BQ9P2D3 2071 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 SPTA1P02549 2419 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 TRIM49P0CI25 452 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 TRIM49CP0CI26 452 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 SERPINB4P48594 390 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 RAPH1Q70E73 1250 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 DDX54Q8TDD1 881 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 NLRP4Q96MN2 994 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 BEGAINQ9BUH8 593 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 NFKBIL1Q9UBC1 381 aaPredicted RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 CACNA1BQ00975 2339 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 APC2O95996 2303 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 IQANK1A0A1B0GTG1 560 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 NUTM2FA1L443 756 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 ACADSP16219 412 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 OTUB1Q96FW1 271 aaPredicted RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 RAB20Q9NX57 234 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 BTBD7Q9P203 1132 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms