RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 THAP12O43422 761 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 PCK1P35558 622 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 MFAP3P55082 362 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 YWHAEP62258 255 aaKnown RBP17.16■□□□□ 0.34
HDAC5-202ENST00000336057 FLAD1Q8NFF5 587 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 KLHL14Q9P2G3 628 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 CCZ1BP86790 482 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 CCZ1P86791 482 aaPredicted RBP17.16■□□□□ 0.34
HDAC5-202ENST00000336057 PPP4R3CPQ6ZMV5 832 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 RUNDC3BQ96NL0 473 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 NACC1Q96RE7 527 aa17.16■□□□□ 0.34
HDAC5-202ENST00000336057 ALS2CLQ60I27 953 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 CCDC62Q6P9F0 684 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 CSRNP1Q96S65 589 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 DHX36Q9H2U1 1008 aaKnown RBP17.15■□□□□ 0.34
HDAC5-202ENST00000336057 ADAMTS1Q9UHI8 967 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 UTYO14607 1347 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 BMP3P12645 472 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 GUCY1A2P33402 732 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 NSFP46459 744 aaKnown RBP17.15■□□□□ 0.34
HDAC5-202ENST00000336057 DPF2Q92785 391 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 ARHGEF2Q92974 986 aaKnown RBP17.15■□□□□ 0.34
HDAC5-202ENST00000336057 FBXO2Q9UK22 296 aaPredicted RBP17.15■□□□□ 0.34
HDAC5-202ENST00000336057 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 USP32Q8NFA0 1604 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 GFPT2O94808 682 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 UBXN2AP68543 259 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 NT5C1BQ96P26 610 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 PNMA2Q9UL42 364 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 APBA3O96018 575 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 KCNJ6P48051 423 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 CCDC13Q8IYE1 715 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 TNS3Q68CZ2 1445 aa17.15■□□□□ 0.34
HDAC5-202ENST00000336057 ANO9A1A5B4 782 aa17.14■□□□□ 0.34
HDAC5-202ENST00000336057 STK10O94804 968 aaKnown RBP17.14■□□□□ 0.34
HDAC5-202ENST00000336057 ATF2P15336 505 aa17.14■□□□□ 0.34
HDAC5-202ENST00000336057 SLC7A5Q01650 507 aa17.14■□□□□ 0.34
HDAC5-202ENST00000336057 EMBQ6PCB8 327 aa17.14■□□□□ 0.34
HDAC5-202ENST00000336057 POMGNT1Q8WZA1 660 aa17.14■□□□□ 0.34
HDAC5-202ENST00000336057 PSMD1Q99460 953 aa17.14■□□□□ 0.34
HDAC5-202ENST00000336057 CLNS1AP54105 237 aaKnown RBP17.14■□□□□ 0.33
HDAC5-202ENST00000336057 ATP2C1P98194 919 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-202ENST00000336057 BBOF1Q8ND07 529 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-202ENST00000336057 WHAMMQ8TF30 809 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 ADAM21Q9UKJ8 722 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 LRRN2O75325 713 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 PRPF6O94906 941 aaKnown RBP17.14■□□□□ 0.33
HDAC5-202ENST00000336057 GDF11O95390 407 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 NNTQ13423 1086 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 E4F1Q66K89 784 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-202ENST00000336057 LMNTD2Q8IXW0 634 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 RSAD2Q8WXG1 361 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 GLG1Q92896 1179 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 CCDC97Q96F63 343 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-202ENST00000336057 GINS2Q9Y248 185 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 I3L4J1 428 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 MYO1FO00160 1098 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 ATF7P17544 494 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-202ENST00000336057 ARL1P40616 181 aaPredicted RBP17.14■□□□□ 0.33
HDAC5-202ENST00000336057 PTK2Q05397 1052 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 ANKRD20A3Q5VUR7 823 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 CCDC110Q8TBZ0 833 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
HDAC5-202ENST00000336057 RFX5P48382 616 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-202ENST00000336057 RASA3Q14644 834 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 CDC37Q16543 378 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-202ENST00000336057 SLC17A8Q8NDX2 589 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 IGDCC4Q8TDY8 1250 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 ANO3Q9BYT9 981 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 PVALEFA0A1B0GWK0 134 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 RASSF2P50749 326 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 BPIFB4P59827 614 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 MAP7D1Q3KQU3 841 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 ALKBH5Q6P6C2 394 aaKnown RBP17.13■□□□□ 0.33
HDAC5-202ENST00000336057 ARHGAP24Q8N264 748 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 CELF1Q92879 486 aaKnown RBP17.13■□□□□ 0.33
HDAC5-202ENST00000336057 PARVGQ9HBI0 331 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-202ENST00000336057 GRM4Q14833 912 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 PALM2Q8IXS6 379 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 CPVLQ9H3G5 476 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 ATP8A1Q9Y2Q0 1164 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
HDAC5-202ENST00000336057 CCDC160A6NGH7 325 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 SRGAP2O75044 1071 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 HSPA1LP34931 641 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 PLTPP55058 493 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 SPATA24Q86W54 205 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 ACCSQ96QU6 501 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 AS3MTQ9HBK9 375 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 MRFAP1Q9Y605 127 aa17.13■□□□□ 0.33
HDAC5-202ENST00000336057 TTC26A0AVF1 554 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 POTEMA6NI47 508 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 DHX9Q08211 1270 aaKnown RBP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 SYDE2Q5VT97 1194 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 INTS9Q9NV88 658 aaKnown RBP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 SSX2IPQ9Y2D8 614 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 PTPN22Q9Y2R2 807 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms