RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 RNF139Q8WU17 664 aa17.71■□□□□ 0.43
PTCH1-201ENST00000331920 DAPK1P53355 1430 aa17.71■□□□□ 0.42
PTCH1-201ENST00000331920 ANXA13P27216 316 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 RBBP7Q16576 425 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 C10orf76Q5T2E6 689 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 NLRP9Q7RTR0 991 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 IQCDQ96DY2 449 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 EPB41L5Q9HCM4 733 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 IMPDH2P12268 514 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 PDE6BP35913 854 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 EIF3CQ99613 913 aaKnown RBP17.7■□□□□ 0.42
PTCH1-201ENST00000331920 BCL2L12Q9HB09 334 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 GTSE1Q9NYZ3 720 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 MAST3O60307 1309 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 GPR162Q16538 588 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 DPP9Q86TI2 863 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 MSH6P52701 1360 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 TCF3P15923 654 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 ARMC9Q7Z3E5 817 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 TDRD7Q8NHU6 1098 aaKnown RBP17.7■□□□□ 0.42
PTCH1-201ENST00000331920 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 SUN2Q9UH99 717 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 CTNND1O60716 968 aaKnown RBP17.7■□□□□ 0.42
PTCH1-201ENST00000331920 AFPP02771 609 aaKnown RBP17.7■□□□□ 0.42
PTCH1-201ENST00000331920 OSBPL10Q9BXB5 764 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 CCDC195A0A1B0GUA6 201 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 EFCAB8A8MWE9 144 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 CEBPAP49715 358 aaPredicted RBP17.7■□□□□ 0.42
PTCH1-201ENST00000331920 CYP4A11Q02928 519 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 GRIN1Q05586 938 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTCH1-201ENST00000331920 GOLGA8DPQ0D2H9 430 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 ADAM9Q13443 819 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 DLGAP5Q15398 846 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 E2F4Q16254 413 aa17.7■□□□□ 0.42
PTCH1-201ENST00000331920 ARL4AP40617 200 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 TFAP4Q01664 338 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 FSCBQ5H9T9 825 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 H0Y3Z8 333 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 SPAG7O75391 227 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 LZTS2Q9BRK4 669 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 SLC24A3Q9HC58 644 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 HSPA4LO95757 839 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 CENPAP49450 140 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 NOSTRINQ8IVI9 506 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 INTS4Q96HW7 963 aaKnown RBP17.69■□□□□ 0.42
PTCH1-201ENST00000331920 KCNG1Q9UIX4 513 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 ALDH1L1O75891 902 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 DMC1Q14565 340 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 CEP78Q5JTW2 689 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 UBXN8O00124 270 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 BRD1O95696 1058 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 EXOC3L4Q17RC7 722 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 ARMC2Q8NEN0 867 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 ATP11BQ9Y2G3 1177 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 MYL1P05976 194 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 STX19Q8N4C7 294 aa17.69■□□□□ 0.42
PTCH1-201ENST00000331920 EXOC1LA0A1B0GW35 172 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 SUPT3HB4E1H0 165 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 HNRNPDLO14979 420 aaKnown RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 AS3MTQ9HBK9 375 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 ADCY3O60266 1144 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 JAK2O60674 1132 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 TMCC1O94876 653 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 POLR2MP0CAP2 368 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 TFAMQ00059 246 aaKnown RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 SLFN12Q8IYM2 578 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 LLPHQ9BRT6 129 aaKnown RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 NXF1Q9UBU9 619 aaKnown RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 PPP2R2CQ9Y2T4 447 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 HSPA1AP0DMV8 641 aaKnown RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 HSPA1BP0DMV9 641 aaKnown RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 IL2RBP14784 551 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 SMAD1Q15797 465 aaKnown RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 CEP85Q6P2H3 762 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 SCARA5Q6ZMJ2 495 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 OR9Q1Q8NGQ5 310 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 ATP2B4P23634 1241 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 CCDC142Q17RM4 750 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 RFX8Q6ZV50 586 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 LRRC4Q9HBW1 653 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 SEC31AO94979 1220 aaKnown RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 ZSCAN20P17040 1043 aaPredicted RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 DCAF4L1Q3SXM0 396 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 AKAP4Q5JQC9 854 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 MRPL50Q8N5N7 158 aaKnown RBP17.68■□□□□ 0.42
PTCH1-201ENST00000331920 TEKT3Q9BXF9 490 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 RANBP1P43487 201 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 RRM2BQ7LG56 351 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 CRLF3Q8IUI8 442 aa17.68■□□□□ 0.42
PTCH1-201ENST00000331920 INO80B-WBP1J3KQ70 363 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 WDR47O94967 919 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 KRT7P08729 469 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 SUPT20HQ8NEM7 779 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 INO80BQ9C086 356 aaPredicted RBP17.67■□□□□ 0.42
PTCH1-201ENST00000331920 ZWILCHQ9H900 591 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 A0A0G2JND7 137 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 CFAP69A5D8W1 941 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 PPIP5K2O43314 1243 aa17.67■□□□□ 0.42
PTCH1-201ENST00000331920 RUNDC3BQ96NL0 473 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms