RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 RAD9BQ6WBX8 426 aa20.37■□□□□ 0.85
SHISA3-201ENST00000319234 CCDC84Q86UT8 332 aaPredicted RBP20.37■□□□□ 0.85
SHISA3-201ENST00000319234 SLFN12Q8IYM2 578 aa20.37■□□□□ 0.85
SHISA3-201ENST00000319234 GIMAP8Q8ND71 665 aaPredicted RBP20.37■□□□□ 0.85
SHISA3-201ENST00000319234 RABGGTAQ92696 567 aa20.37■□□□□ 0.85
SHISA3-201ENST00000319234 UPF1Q92900 1129 aaKnown RBP eCLIP20.37■□□□□ 0.85
SHISA3-201ENST00000319234 ZNF341Q9BYN7 854 aa20.37■□□□□ 0.85
SHISA3-201ENST00000319234 ZNF541Q9H0D2 1346 aa20.36■□□□□ 0.85
SHISA3-201ENST00000319234 N4BP3O15049 544 aa20.36■□□□□ 0.85
SHISA3-201ENST00000319234 SLC26A4O43511 780 aa20.36■□□□□ 0.85
SHISA3-201ENST00000319234 KIF5CO60282 957 aa20.36■□□□□ 0.85
SHISA3-201ENST00000319234 CTNND1O60716 968 aaKnown RBP20.36■□□□□ 0.85
SHISA3-201ENST00000319234 GYPCP04921 128 aa20.36■□□□□ 0.85
SHISA3-201ENST00000319234 PNMA6AP0CW24 399 aaPredicted RBP20.36■□□□□ 0.85
SHISA3-201ENST00000319234 COPB1P53618 953 aaKnown RBP20.36■□□□□ 0.85
SHISA3-201ENST00000319234 MTF1Q14872 753 aa20.36■□□□□ 0.85
SHISA3-201ENST00000319234 NUDT12Q9BQG2 462 aa20.36■□□□□ 0.85
SHISA3-201ENST00000319234 DEFB129Q9H1M3 183 aa20.36■□□□□ 0.85
SHISA3-201ENST00000319234 H7C1D1 291 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 TBX3O15119 743 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 CASP14P31944 242 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 CIITAP33076 1130 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 TUBB4BP68371 445 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 ASIC1P78348 528 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 STIM1Q13586 685 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 TERF2Q15554 542 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 TCP11X2Q5H9J9 407 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 LARP4BQ92615 738 aaKnown RBP20.35■□□□□ 0.85
SHISA3-201ENST00000319234 RAD54LQ92698 747 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 GJA10Q969M2 543 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 MRPL11Q9Y3B7 192 aaKnown RBP20.35■□□□□ 0.85
SHISA3-201ENST00000319234 CYP3A4P08684 503 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 HOXA13P31271 388 aaPredicted RBP20.35■□□□□ 0.85
SHISA3-201ENST00000319234 GOLGA1Q92805 767 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 LRRC27Q9C0I9 530 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 EXOC1Q9NV70 894 aa20.35■□□□□ 0.85
SHISA3-201ENST00000319234 KCNJ18B7U540 433 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 KCNJ12Q14500 433 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 MCM6Q14566 821 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 HYIQ5T013 277 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 CPLX3Q8WVH0 158 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 MAPK8IP1Q9UQF2 711 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 KDM3AQ9Y4C1 1321 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 GCOM1H8Y6P7 765 aaPredicted RBP20.34■□□□□ 0.85
SHISA3-201ENST00000319234 POLR2MP0CAP2 368 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 FXR1P51114 621 aaKnown RBP eCLIP20.34■□□□□ 0.85
SHISA3-201ENST00000319234 PDE4DQ08499 809 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 PRR16Q569H4 304 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 ETNPPLQ8TBG4 499 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 LPAR1Q92633 364 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 KIAA1683Q9H0B3 1180 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 FBXO28Q9NVF7 368 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 MYO1AQ9UBC5 1043 aa20.34■□□□□ 0.85
SHISA3-201ENST00000319234 ABCB11O95342 1321 aa20.33■□□□□ 0.85
SHISA3-201ENST00000319234 WDR46O15213 610 aaKnown RBP20.33■□□□□ 0.84
SHISA3-201ENST00000319234 COBLO75128 1261 aa20.33■□□□□ 0.84
SHISA3-201ENST00000319234 CCT6AP40227 531 aaKnown RBP20.33■□□□□ 0.84
SHISA3-201ENST00000319234 DCAF15Q66K64 600 aa20.33■□□□□ 0.84
SHISA3-201ENST00000319234 CNNM4Q6P4Q7 775 aa20.33■□□□□ 0.84
SHISA3-201ENST00000319234 CYP26C1Q6V0L0 522 aa20.33■□□□□ 0.84
SHISA3-201ENST00000319234 LENG9Q96B70 501 aa20.33■□□□□ 0.84
SHISA3-201ENST00000319234 DHTKD1Q96HY7 919 aaPredicted RBP20.33■□□□□ 0.84
SHISA3-201ENST00000319234 NT5C3AQ9H0P0 336 aa20.33■□□□□ 0.84
SHISA3-201ENST00000319234 ABHD10Q9NUJ1 306 aa20.33■□□□□ 0.84
SHISA3-201ENST00000319234 GOLGB1Q14789 3259 aaKnown RBP20.32■□□□□ 0.84
SHISA3-201ENST00000319234 PVALEFA0A1B0GWK0 134 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 MYMKA6NI61 221 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 PSMA7O14818 248 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 CFBP00751 764 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 INPP5BP32019 993 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 PPP1R2P41236 205 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 ECM1Q16610 540 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 NBPF12Q5TAG4 269 aaPredicted RBP20.32■□□□□ 0.84
SHISA3-201ENST00000319234 LDHDQ86WU2 507 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 CEP112Q8N8E3 955 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 FAM20AQ96MK3 541 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 ATAD5Q96QE3 1844 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 FAM86B1E9PN63 330 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 FAM86B2P0C5J1 330 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 COBLL1Q53SF7 1204 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 UNC13DQ70J99 1090 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 ZNF771Q7L3S4 317 aaPredicted RBP20.32■□□□□ 0.84
SHISA3-201ENST00000319234 KCNK18Q7Z418 384 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 APOBEC3FQ8IUX4 373 aaKnown RBP20.32■□□□□ 0.84
SHISA3-201ENST00000319234 TBC1D5Q92609 795 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 LZTFL1Q9NQ48 299 aa20.32■□□□□ 0.84
SHISA3-201ENST00000319234 EEF1GP26641 437 aaKnown RBP20.31■□□□□ 0.84
SHISA3-201ENST00000319234 ZNF76P36508 570 aa20.31■□□□□ 0.84
SHISA3-201ENST00000319234 TEX35Q5T0J7 233 aa20.31■□□□□ 0.84
SHISA3-201ENST00000319234 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
SHISA3-201ENST00000319234 SRGAP1Q7Z6B7 1085 aa20.31■□□□□ 0.84
SHISA3-201ENST00000319234 NOC3LQ8WTT2 800 aaKnown RBP20.31■□□□□ 0.84
SHISA3-201ENST00000319234 HOOK2Q96ED9 719 aa20.31■□□□□ 0.84
SHISA3-201ENST00000319234 THAP9Q9H5L6 903 aa20.31■□□□□ 0.84
SHISA3-201ENST00000319234 CDC23Q9UJX2 597 aa20.31■□□□□ 0.84
SHISA3-201ENST00000319234 A0A1W2PQC6 194 aa20.3■□□□□ 0.84
SHISA3-201ENST00000319234 HOXA7P31268 230 aaPredicted RBP20.3■□□□□ 0.84
SHISA3-201ENST00000319234 STK4Q13043 487 aa20.3■□□□□ 0.84
SHISA3-201ENST00000319234 PRPF38AQ8NAV1 312 aaKnown RBP20.3■□□□□ 0.84
SHISA3-201ENST00000319234 UIMC1Q96RL1 719 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms