RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 DRC1Q96MC2 740 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 TRERF1Q96PN7 1200 aa16.88■□□□□ 0.29
DDX56-201ENST00000258772 FKBP3Q00688 224 aaKnown RBP16.87■□□□□ 0.29
DDX56-201ENST00000258772 SEPT2Q15019 361 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 ZCWPW2Q504Y3 356 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 CACNA2D4Q7Z3S7 1137 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 GSPT2Q8IYD1 628 aaKnown RBP16.87■□□□□ 0.29
DDX56-201ENST00000258772 ALS2CR12Q96Q35 445 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 OSBPL9Q96SU4 736 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 SELENOOQ9BVL4 669 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 RPS6KA5O75582 802 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 TCP1P17987 556 aaKnown RBP16.87■□□□□ 0.29
DDX56-201ENST00000258772 GTF2IP78347 998 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
DDX56-201ENST00000258772 TTBK2Q6IQ55 1244 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 GPIHBP1Q8IV16 184 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 SPATA4Q8NEY3 305 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 CUL5Q93034 780 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 GJA10Q969M2 543 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 TANGO6Q9C0B7 1094 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 SALL4Q9UJQ4 1053 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 PCDHA12Q9UN75 941 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 COL4A3BPQ9Y5P4 624 aa16.87■□□□□ 0.29
DDX56-201ENST00000258772 SSU72P8A0A1W2PR75 194 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 C6orf229H3BNL8 230 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 TRAF5O00463 557 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 SERPINB2P05120 415 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 MRPL12P52815 198 aaKnown RBP16.86■□□□□ 0.29
DDX56-201ENST00000258772 HGSNATQ68CP4 663 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 ARHGAP27Q6ZUM4 889 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 LRRC1Q9BTT6 524 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 PANK4Q9NVE7 773 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 HYOU1Q9Y4L1 999 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 MARCH6O60337 910 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 GFPT1Q06210 699 aaPredicted RBP16.86■□□□□ 0.29
DDX56-201ENST00000258772 FAM26FQ5R3K3 315 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 NFRKBQ6P4R8 1299 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 AENQ8WTP8 325 aaKnown RBP16.86■□□□□ 0.29
DDX56-201ENST00000258772 CRACR2AQ9BSW2 395 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 DDX4Q9NQI0 724 aaKnown RBP16.86■□□□□ 0.29
DDX56-201ENST00000258772 SERPINB13Q9UIV8 391 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 FAM184BQ9ULE4 1060 aa16.86■□□□□ 0.29
DDX56-201ENST00000258772 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
DDX56-201ENST00000258772 IVLP07476 585 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 GGCXP38435 758 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 RASSF7Q02833 373 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 EZH2Q15910 746 aaKnown RBP16.85■□□□□ 0.29
DDX56-201ENST00000258772 HYIQ5T013 277 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 ANKRD13CQ8N6S4 541 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 GOLGA6L1Q8N7Z2 621 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 HDAC7Q8WUI4 952 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 RIN2Q8WYP3 895 aaPredicted RBP16.85■□□□□ 0.29
DDX56-201ENST00000258772 HINFPQ9BQA5 517 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 BMP2KQ9NSY1 1161 aaPredicted RBP16.85■□□□□ 0.29
DDX56-201ENST00000258772 DMGDHQ9UI17 866 aaKnown RBP16.85■□□□□ 0.29
DDX56-201ENST00000258772 A0A0U1RQG5 324 aaPredicted RBP16.85■□□□□ 0.29
DDX56-201ENST00000258772 AGPSO00116 658 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 NOL4O94818 638 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 GCFC2P16383 781 aaKnown RBP16.85■□□□□ 0.29
DDX56-201ENST00000258772 ADRA2BP18089 450 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 CCDC40Q4G0X9 1142 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 RNF10Q8N5U6 811 aaKnown RBP16.85■□□□□ 0.29
DDX56-201ENST00000258772 AFAP1L1Q8TED9 768 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 NT5C3AQ9H0P0 336 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 PSTPIP2Q9H939 334 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 NLRC4Q9NPP4 1024 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 CEP72Q9P209 647 aa16.85■□□□□ 0.29
DDX56-201ENST00000258772 F8W031 263 aaPredicted RBP16.84■□□□□ 0.29
DDX56-201ENST00000258772 RBAK-RBAKDNI3L0D1 243 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 ZBTB5O15062 677 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 SSBP05455 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDX56-201ENST00000258772 GYS1P13807 737 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 HOXA10P31260 410 aaPredicted RBP16.84■□□□□ 0.29
DDX56-201ENST00000258772 CXCR5P32302 372 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 SLC16A2P36021 539 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
DDX56-201ENST00000258772 RUBCNQ92622 972 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 MTMR8Q96EF0 704 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 CEP63Q96MT8 703 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 PSMB7Q99436 277 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 TLR10Q9BXR5 811 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 NUCKS1Q9H1E3 243 aaKnown RBP16.84■□□□□ 0.29
DDX56-201ENST00000258772 LRRC4BQ9NT99 713 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 SWAP70Q9UH65 585 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 PCDHA2Q9Y5H9 948 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 USP17L10C9JJH3 530 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 E9PMD0 336 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 TLR2O60603 784 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 SLC1A4P43007 532 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 SLC9C1Q4G0N8 1177 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 TDRD12Q587J7 1177 aaKnown RBP16.84■□□□□ 0.29
DDX56-201ENST00000258772 FAM83BQ5T0W9 1011 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 SAMD1Q6SPF0 538 aaPredicted RBP16.84■□□□□ 0.29
DDX56-201ENST00000258772 SYN2Q92777 582 aaPredicted RBP16.84■□□□□ 0.29
DDX56-201ENST00000258772 NOX5Q96PH1 765 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 FGFBP2Q9BYJ0 223 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 TBC1D7Q9P0N9 293 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 KIAA1024Q9UPX6 916 aa16.84■□□□□ 0.29
DDX56-201ENST00000258772 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms