RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 CYFIP2Q96F07 1278 aa11.52□□□□□ -0.56
DDX11-201ENST00000228264 NUCKS1Q9H1E3 243 aaKnown RBP11.52□□□□□ -0.56
DDX11-201ENST00000228264 KLC4Q9NSK0 619 aa11.52□□□□□ -0.56
DDX11-201ENST00000228264 CCNE1P24864 410 aa11.52□□□□□ -0.57
DDX11-201ENST00000228264 N4BP2L2Q92802 583 aaPredicted RBP11.52□□□□□ -0.57
DDX11-201ENST00000228264 BIN2Q9UBW5 565 aaPredicted RBP11.52□□□□□ -0.57
DDX11-201ENST00000228264 HSD17B3P37058 310 aa11.52□□□□□ -0.57
DDX11-201ENST00000228264 MDH1P40925 334 aaKnown RBP11.52□□□□□ -0.57
DDX11-201ENST00000228264 ASTE1Q2TB18 679 aaPredicted RBP11.52□□□□□ -0.57
DDX11-201ENST00000228264 CCDC40Q4G0X9 1142 aa11.52□□□□□ -0.57
DDX11-201ENST00000228264 FAM133AQ8N9E0 248 aa11.52□□□□□ -0.57
DDX11-201ENST00000228264 GPR101Q96P66 508 aaPredicted RBP11.52□□□□□ -0.57
DDX11-201ENST00000228264 BCORQ6W2J9 1755 aa11.52□□□□□ -0.57
DDX11-201ENST00000228264 DISP2A7MBM2 1401 aa11.52□□□□□ -0.57
DDX11-201ENST00000228264 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 M0R2N6 131 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 POLR2FP61218 127 aaKnown RBP11.51□□□□□ -0.57
DDX11-201ENST00000228264 TFAP4Q01664 338 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 DHX9Q08211 1270 aaKnown RBP11.51□□□□□ -0.57
DDX11-201ENST00000228264 VWA3BQ502W6 1294 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 MAEAQ7L5Y9 396 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 DCP1AQ9NPI6 582 aaPredicted RBP11.51□□□□□ -0.57
DDX11-201ENST00000228264 RMND1Q9NWS8 449 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 LEMD3Q9Y2U8 911 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 RTL9Q8NET4 1388 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 KIAA0754O94854 1291 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 UBA5Q9GZZ9 404 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 GDF3Q9NR23 364 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 CHORDC1Q9UHD1 332 aaPredicted RBP11.51□□□□□ -0.57
DDX11-201ENST00000228264 STX8Q9UNK0 236 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 TUBBP07437 444 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 LONP1P36776 959 aaKnown RBP11.51□□□□□ -0.57
DDX11-201ENST00000228264 MECOMQ03112 1051 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 GBP6Q6ZN66 633 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 CCDC170Q8IYT3 715 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 DPH5Q9H2P9 285 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 BLOC1S4Q9NUP1 217 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 AMACRQ9UHK6 382 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 SAP30BPQ9UHR5 308 aaKnown RBP11.51□□□□□ -0.57
DDX11-201ENST00000228264 TIAM2Q8IVF5 1701 aa11.51□□□□□ -0.57
DDX11-201ENST00000228264 PARP4Q9UKK3 1724 aaKnown RBP11.51□□□□□ -0.57
DDX11-201ENST00000228264 DUOX1Q9NRD9 1551 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 GRID2IPA4D2P6 1211 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 KCNK3O14649 394 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 SLC37A4O43826 429 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 EDIL3O43854 480 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 RASSF9O75901 435 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 MYBL1P10243 752 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 ZNF844Q08AG5 666 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 AADACL2Q6P093 401 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 USP17L2Q6R6M4 530 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 KDM7AQ6ZMT4 941 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 ZSCAN29Q8IWY8 852 aaPredicted RBP11.5□□□□□ -0.57
DDX11-201ENST00000228264 FNBP4Q8N3X1 1017 aaPredicted RBP11.5□□□□□ -0.57
DDX11-201ENST00000228264 ATP6V1G3Q96LB4 118 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 AJAP1Q9UKB5 411 aaPredicted RBP11.5□□□□□ -0.57
DDX11-201ENST00000228264 TPX2Q9ULW0 747 aaKnown RBP11.5□□□□□ -0.57
DDX11-201ENST00000228264 L3MBTL1Q9Y468 752 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 OPA1O60313 960 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 FSBPO95073 299 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 SHBGP04278 402 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 GJB7Q6PEY0 223 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 CAVIN3Q969G5 261 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 PCDHA4Q9UN74 947 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 NOVA2Q9UNW9 492 aaKnown RBP11.5□□□□□ -0.57
DDX11-201ENST00000228264 MROH5Q6ZUA9 1318 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 KIF3CO14782 793 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 DAPK3O43293 454 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 TDP2O95551 362 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 EPB41P11171 864 aaKnown RBP11.5□□□□□ -0.57
DDX11-201ENST00000228264 MCM3P25205 808 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 TUBB4BP68371 445 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 KIAA0753Q2KHM9 967 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 EMBQ6PCB8 327 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 CACNA2D4Q7Z3S7 1137 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 PNMA1Q8ND90 353 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 INPP4AQ96PE3 977 aaPredicted RBP11.5□□□□□ -0.57
DDX11-201ENST00000228264 VCPKMTQ9H867 229 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 MCM9Q9NXL9 1143 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 CPSF2Q9P2I0 782 aaKnown RBP11.5□□□□□ -0.57
DDX11-201ENST00000228264 MAD2L2Q9UI95 211 aa11.5□□□□□ -0.57
DDX11-201ENST00000228264 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.5□□□□□ -0.57
DDX11-201ENST00000228264 H0YGN5 161 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 USO1O60763 962 aaKnown RBP11.49□□□□□ -0.57
DDX11-201ENST00000228264 PAFAH1B1P43034 410 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 DIXDC1Q155Q3 683 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 C6orf89Q6UWU4 347 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 EHBP1Q8NDI1 1231 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 UBLCP1Q8WVY7 318 aaPredicted RBP11.49□□□□□ -0.57
DDX11-201ENST00000228264 ACSBG1Q96GR2 724 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 RPGRIP1Q96KN7 1286 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 TRIM51Q9BSJ1 452 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 SUDS3Q9H7L9 328 aaPredicted RBP11.49□□□□□ -0.57
DDX11-201ENST00000228264 NFS1Q9Y697 457 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 GRB10Q13322 594 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 RAPGEF1Q13905 1077 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 SLC30A10Q6XR72 485 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 LRRC55Q6ZSA7 311 aa11.49□□□□□ -0.57
DDX11-201ENST00000228264 CELF1Q92879 486 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms