RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Megf6Q80V70 1572 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Nrxn2E9Q7X7 1710 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Gm13023A2A8N2 498 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 PurbO35295 324 aaKnown RBP6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Mapkapk5O54992 473 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Kcna2P63141 499 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Top1Q04750 767 aaKnown RBP6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Armc2Q3URY6 854 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 ChpfQ6IQX7 774 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 NfrkbQ6PIJ4 1296 aaKnown RBP6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Rnf168Q80XJ2 565 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Taf6lQ8R2K4 616 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Slc14a2Q8R4T9 930 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Smc1bQ920F6 1248 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Plagl2Q925T4 496 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Slc39a3Q99K24 317 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 ToporslQ9D2F8 683 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Snrnp35Q9D384 244 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Tmem47Q9JJG6 181 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Nr2e3Q9QXZ7 395 aa6.9□□□□□ -1.3
Lig4-202ENSMUST00000170033 Pitpnm2Q6ZPQ6 1335 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gm5737A0A140LI11 423 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Zfand4D3Z3C6 739 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gm3893E9Q1I1 302 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 C2cd2E9Q3C1 696 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gm42641I6L9G2 585 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 DnttP09838 530 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Casp1P29452 402 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Nr5a1P33242 462 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Abcd1P48410 736 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Nat2P50295 290 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Elf1Q60775 612 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ccna1Q61456 421 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Txndc16Q7TN22 820 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Dlg1Q811D0 905 aaKnown RBP6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 AtripQ8BMG1 785 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Q8C1R3 189 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ppm1fQ8CGA0 452 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Amhr2Q8K592 568 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 AdarQ99MU3 1178 aaKnown RBP6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Bcl11bQ99PV8 884 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Smc1aQ9CU62 1233 aaKnown RBP6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Trim42Q9D2H5 723 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Inpp4aQ9EPW0 939 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Rpf2Q9JJ80 306 aaKnown RBP6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 ArcQ9WV31 396 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Eif2ak3Q9Z2B5 1114 aa6.9□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gm5580A0A0N4SVP8 411 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gm1993A6X8I0 212 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Qtrt2B8ZXI1 415 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 SlxD3Z347 212 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Nol4P60954 483 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 PrlrQ08501 608 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Sf3b2Q3UJB0 878 aaKnown RBP6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Phactr4Q501J7 694 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Tsg101Q61187 391 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gemin4Q6P6L6 1058 aaKnown RBP6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 IqceQ6PCQ0 778 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ccp110Q7TSH4 1004 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Map3k11Q80XI6 850 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Zdhhc14Q8BQQ1 489 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ccdc73Q8CDM4 1066 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Katnal1Q8K0T4 488 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Mmgt1Q8K273 131 aaKnown RBP6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Znf131Q8K3J5 619 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 GlyctkQ8QZY2 523 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Exoc1Q8R3S6 894 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Tor1aip1Q921T2 595 aaKnown RBP6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Glrx3Q9CQM9 337 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Zmym2Q9CU65 1376 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gm4985A2ALC6 410 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Nhsl2B1AXH1 854 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Tcp1P11983 556 aaKnown RBP6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Rps6ka3P18654 740 aaKnown RBP6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Nedd1P33215 660 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 PtgdrP70263 357 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ssrp1Q08943 708 aaKnown RBP6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Psd3Q2PFD7 1037 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 VeztQ3ZK22 780 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Krt87Q6IMF0 495 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ankrd24Q80VM7 985 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Clic6Q8BHB9 596 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gga3Q8BMI3 718 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Utp15Q8C7V3 528 aaKnown RBP6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gtpbp10Q8K013 366 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Tcp11l2Q8K1H7 517 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Sgms1Q8VCQ6 419 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Txndc5Q91W90 417 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Erlin1Q91X78 346 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Xrcc4Q924T3 326 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Sar1bQ9CQC9 198 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Dbndd1Q9CZ00 160 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Ribc1Q9D0B8 379 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 SynrgQ5SV85 1306 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Arhgap33Q80YF9 1305 aa6.89□□□□□ -1.31
Lig4-202ENSMUST00000170033 Fam124aD3Z5V4 536 aa6.88□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gucy1a2F8VQK3 730 aa6.88□□□□□ -1.31
Lig4-202ENSMUST00000170033 Gm3415J3QMS8 315 aa6.88□□□□□ -1.31
Lig4-202ENSMUST00000170033 Stat4P42228 749 aa6.88□□□□□ -1.31
Lig4-202ENSMUST00000170033 Pfkfb2P70265 519 aa6.88□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 41.1 ms