RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 PRPHP41219 470 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 SLC1A4P43007 532 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 ADCY7P51828 1080 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 TTBK2Q6IQ55 1244 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 NGLY1Q96IV0 654 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 ALS2CR12Q96Q35 445 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 EHD4Q9H223 541 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 MED4Q9NPJ6 270 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 SALL4Q9UJQ4 1053 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 ABCA3Q99758 1704 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 EPS15P42566 896 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 KCTD1Q719H9 257 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 RETREG2Q8NC44 543 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 SNX12Q9UMY4 172 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 EP400Q96L91 3159 aa16.18■□□□□ 0.18
SCARB2-221ENST00000640341 POLR2FP61218 127 aaKnown RBP16.17■□□□□ 0.18
SCARB2-221ENST00000640341 GPSM2P81274 684 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 MUM1L1Q5H9M0 696 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 KCTD16Q68DU8 428 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 CCNI2Q6ZMN8 369 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-221ENST00000640341 RUFY1Q96T51 708 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
SCARB2-221ENST00000640341 GOLGA6CA6NDK9 693 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 TUBBP07437 444 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 GOLGA6DP0CG33 693 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 MCM3P25205 808 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 PAFAH1B1P43034 410 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 RAPGEF1Q13905 1077 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 IQCEQ6IPM2 695 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 DAGLBQ8NCG7 672 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 SPATA4Q8NEY3 305 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 PNMA5Q96PV4 448 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 OSBPL9Q96SU4 736 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 RASSF4Q9H2L5 321 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 CUEDC2Q9H467 287 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 CD209Q9NNX6 404 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 GOLGA6AQ9NYA3 693 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 PLAGL2Q9UPG8 496 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 JRKLQ9Y4A0 524 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 GTF2IP78347 998 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 LRRC31Q6UY01 552 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 SPZ1Q9BXG8 430 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 FGFBP2Q9BYJ0 223 aa16.17■□□□□ 0.18
SCARB2-221ENST00000640341 ZSCAN5CA6NGD5 496 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-221ENST00000640341 E9PMD0 336 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 RPS6KA4O75676 772 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 MAN2A1Q16706 1144 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 SRLQ86TD4 932 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 CREG2Q8IUH2 290 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 ERGIC2Q96RQ1 377 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 TSG101Q99816 390 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 SH2D4AQ9H788 454 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 SPATA31A5Q5VU36 1347 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 SPATA31A7Q8IWB4 1347 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 ECM1Q16610 540 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 PROCA1Q8NCQ7 364 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-221ENST00000640341 MXD3Q9BW11 206 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 RAB34Q9BZG1 259 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 PSD3Q9NYI0 1048 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 THRAP3Q9Y2W1 955 aaKnown RBP16.16■□□□□ 0.18
SCARB2-221ENST00000640341 FAM196BA6NMK8 535 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 TULP2O00295 520 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 IVLP07476 585 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 PDHBP11177 359 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 AKR1B1P15121 316 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 SCNN1DP51172 638 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 GRAPQ13588 217 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 CENPPQ6IPU0 288 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 UNC13DQ70J99 1090 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 NEDD1Q8NHV4 660 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 GRAPLQ8TC17 118 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-221ENST00000640341 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 LZTS2Q9BRK4 669 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 TSGA10Q9BZW7 698 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 CENPHQ9H3R5 247 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 GOLPH3Q9H4A6 298 aa16.16■□□□□ 0.18
SCARB2-221ENST00000640341 GUCY2FP51841 1108 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 HERC4Q5GLZ8 1057 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-221ENST00000640341 C8orf74Q6P047 294 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 FAM76AQ8TAV0 307 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 LSM14BQ9BX40 385 aaKnown RBP16.15■□□□□ 0.18
SCARB2-221ENST00000640341 KIAA1024Q9UPX6 916 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L15C9J2P7 530 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L13C9JLJ4 530 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L11C9JVI0 530 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L18D6R9N7 530 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L22D6RA61 530 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L17D6RBQ6 530 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L19D6RCP7 530 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L20D6RJB6 530 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 SNAP25P60880 206 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L24Q0WX57 530 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 USP17L6PQ6QN14 398 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-221ENST00000640341 CCDC84Q86UT8 332 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-221ENST00000640341 RBM12Q9NTZ6 932 aaKnown RBP16.15■□□□□ 0.18
SCARB2-221ENST00000640341 ADAMTS1Q9UHI8 967 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 DDX25Q9UHL0 483 aaKnown RBP16.15■□□□□ 0.18
SCARB2-221ENST00000640341 FAM196AQ6ZSG2 479 aa16.15■□□□□ 0.18
SCARB2-221ENST00000640341 C16orf86Q6ZW13 317 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms