RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 DEPDC5O75140 1603 aa16.02■□□□□ 0.15
VPS36-207ENST00000611132 F8W031 263 aaPredicted RBP16.02■□□□□ 0.15
VPS36-207ENST00000611132 GUCY1A3Q02108 690 aa16.02■□□□□ 0.15
VPS36-207ENST00000611132 CHRNDQ07001 517 aa16.02■□□□□ 0.15
VPS36-207ENST00000611132 DPYDQ12882 1025 aa16.02■□□□□ 0.15
VPS36-207ENST00000611132 VWDEQ8N2E2 1590 aa16.02■□□□□ 0.15
VPS36-207ENST00000611132 CCDC188H7C350 402 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 FAM133BQ5BKY9 247 aaKnown RBP16.01■□□□□ 0.15
VPS36-207ENST00000611132 KIFAP3Q92845 792 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 MRRFQ96E11 262 aaKnown RBP16.01■□□□□ 0.15
VPS36-207ENST00000611132 FMO2Q99518 471 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 FAM170AA1A519 330 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 CCDC160A6NGH7 325 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 NCK2O43639 380 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 EXOC3O60645 756 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 C10orf76Q5T2E6 689 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 KRT26Q7Z3Y9 468 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 TGFBRAP1Q8WUH2 860 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 AP1M1Q9BXS5 423 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 CXorf56Q9H5V9 222 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 CD2APQ9Y5K6 639 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 LRRC53A6NM62 1247 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 ATP2A2P16615 1042 aaKnown RBP16.01■□□□□ 0.15
VPS36-207ENST00000611132 RFX5P48382 616 aaPredicted RBP16.01■□□□□ 0.15
VPS36-207ENST00000611132 DYNLL1P63167 89 aaKnown RBP16.01■□□□□ 0.15
VPS36-207ENST00000611132 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
VPS36-207ENST00000611132 NEK9Q8TD19 979 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 IGDCC4Q8TDY8 1250 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 EYA3Q99504 573 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 ANKZF1Q9H8Y5 726 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 LRRIQ3A6PVS8 624 aaPredicted RBP16.01■□□□□ 0.15
VPS36-207ENST00000611132 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 MAGOHBQ96A72 148 aaKnown RBP16.01■□□□□ 0.15
VPS36-207ENST00000611132 KAZALD1Q96I82 304 aa16.01■□□□□ 0.15
VPS36-207ENST00000611132 CYP2D7A0A087X1C5 515 aa16■□□□□ 0.15
VPS36-207ENST00000611132 NLRP10Q86W26 655 aa16■□□□□ 0.15
VPS36-207ENST00000611132 VPS52Q8N1B4 723 aa16■□□□□ 0.15
VPS36-207ENST00000611132 MYCT1Q8N699 235 aa16■□□□□ 0.15
VPS36-207ENST00000611132 STK24Q9Y6E0 443 aa16■□□□□ 0.15
VPS36-207ENST00000611132 NR2F2P24468 414 aa16■□□□□ 0.15
VPS36-207ENST00000611132 MUM1Q2TAK8 710 aa16■□□□□ 0.15
VPS36-207ENST00000611132 AGXT2Q9BYV1 514 aa16■□□□□ 0.15
VPS36-207ENST00000611132 CIB2O75838 187 aa16■□□□□ 0.15
VPS36-207ENST00000611132 TBC1D1Q86TI0 1168 aaPredicted RBP16■□□□□ 0.15
VPS36-207ENST00000611132 EPN3Q9H201 632 aa16■□□□□ 0.15
VPS36-207ENST00000611132 RAB21Q9UL25 225 aa16■□□□□ 0.15
VPS36-207ENST00000611132 PTPRUQ92729 1446 aa16■□□□□ 0.15
VPS36-207ENST00000611132 GRIN1Q05586 938 aa15.99■□□□□ 0.15
VPS36-207ENST00000611132 MAIP1Q8WWC4 291 aa15.99■□□□□ 0.15
VPS36-207ENST00000611132 ARHGAP24Q8N264 748 aa15.99■□□□□ 0.15
VPS36-207ENST00000611132 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
VPS36-207ENST00000611132 KIF1CO43896 1103 aaKnown RBP15.99■□□□□ 0.15
VPS36-207ENST00000611132 FERP16591 822 aa15.99■□□□□ 0.15
VPS36-207ENST00000611132 GFPT1Q06210 699 aaPredicted RBP15.99■□□□□ 0.15
VPS36-207ENST00000611132 PASKQ96RG2 1323 aa15.99■□□□□ 0.15
VPS36-207ENST00000611132 CCDC62Q6P9F0 684 aa15.99■□□□□ 0.15
VPS36-207ENST00000611132 MROH2AA6NES4 1674 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 HOXA7P31268 230 aaPredicted RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 PPP2R2AP63151 447 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 PPP4R3AQ6IN85 833 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 ALKBH5Q6P6C2 394 aaKnown RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 ENAHQ8N8S7 591 aaPredicted RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 TBCKQ8TEA7 893 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 CCT8L2Q96SF2 557 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 TRIM6Q9C030 488 aaPredicted RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 TAF1DQ9H5J8 278 aaPredicted RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 KRT5P13647 590 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 HNRNPH1P31943 449 aaKnown RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 PSMD2Q13200 908 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 SEMA3FQ13275 785 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 PARP9Q8IXQ6 854 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 CCHCR1Q8TD31 782 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 P3H4Q92791 437 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 HVCN1Q96D96 273 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 LRRD1A4D1F6 860 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 FAM205CA6NFA0 338 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 LMNB1P20700 586 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 MDH1P40925 334 aaKnown RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 DRP2Q13474 957 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 UAP1Q16222 522 aaPredicted RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 CCDC13Q8IYE1 715 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 PSMD1Q99460 953 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 GRID2IPA4D2P6 1211 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 THAP12O43422 761 aa15.98■□□□□ 0.15
VPS36-207ENST00000611132 MAGOHP61326 146 aaKnown RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 RBBP5Q15291 538 aaKnown RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 ZNF473Q8WTR7 871 aaKnown RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 DDX17Q92841 729 aaKnown RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 DDX25Q9UHL0 483 aaKnown RBP15.98■□□□□ 0.15
VPS36-207ENST00000611132 GSG1L2A8MUP6 293 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 CHMP2AO43633 222 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 STAMBPO95630 424 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 ERVK-24P63145 666 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 KCNB1Q14721 858 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 ZKSCAN8Q15776 578 aaPredicted RBP15.97■□□□□ 0.15
VPS36-207ENST00000611132 PFKFB3Q16875 520 aaPredicted RBP15.97■□□□□ 0.15
VPS36-207ENST00000611132 ANKRD20A3Q5VUR7 823 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 ADSSL1Q8N142 457 aa15.97■□□□□ 0.15
VPS36-207ENST00000611132 CEP63Q96MT8 703 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms