RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 POGKQ9P215 609 aa6.67□□□□□ -1.34
LSM1P2-201ENST00000604911 PCDHA4Q9UN74 947 aa6.67□□□□□ -1.34
LSM1P2-201ENST00000604911 CGNL1Q0VF96 1302 aa6.67□□□□□ -1.34
LSM1P2-201ENST00000604911 CNTNAP4Q9C0A0 1308 aa6.67□□□□□ -1.34
LSM1P2-201ENST00000604911 PRR33A8MZF0 331 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 GOLGA6L19H0YKK7 550 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 MYO1CO00159 1063 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 FBXO24O75426 580 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 TSPAN15O95858 294 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 PECAM1P16284 738 aaPredicted RBP6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 ENPP1P22413 925 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 PSMA3P25788 255 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 SMARCA1P28370 1054 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 TPP2P29144 1249 aaPredicted RBP6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 CAP2P40123 477 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 MAGEA9P43362 315 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 AFMP43652 599 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 MNAT1P51948 309 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 FMR1Q06787 632 aaKnown RBP eCLIP6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 SLBPQ14493 270 aaKnown RBP eCLIP6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 CRYMQ14894 314 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 PLEKHG6Q3KR16 790 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 CCDC122Q5T0U0 273 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 AGAP9Q5VTM2 703 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 PACS1Q6VY07 963 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 CYFIP1Q7L576 1253 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 FAM114A1Q8IWE2 563 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 KRT222Q8N1A0 295 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 ERMNQ8TAM6 284 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 ZNF507Q8TCN5 953 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 PPM1EQ8WY54 764 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 ANKRD7Q92527 254 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 NAF1Q96HR8 494 aaKnown RBP6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 MPHOSPH6Q99547 160 aaKnown RBP6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 SLC39A3Q9BRY0 314 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 KRTAP4-2Q9BYR5 136 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 LRRCC1Q9C099 1032 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 FBRSQ9HAH7 460 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 MKS1Q9NXB0 559 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 SEL1LQ9UBV2 794 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 CYP8B1Q9UNU6 501 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 SLC30A1Q9Y6M5 507 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 AKNAQ7Z591 1439 aa6.66□□□□□ -1.34
LSM1P2-201ENST00000604911 KRTAP9-7A8MTY7 169 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 GIPC1O14908 333 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 CPP00450 1065 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 RPN1P04843 607 aaKnown RBP6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 GLI1P08151 1106 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 RBP3P10745 1247 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 TRIM21P19474 475 aaKnown RBP6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 MAPK1P28482 360 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 HNRNPH2P55795 449 aaKnown RBP6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 PTPN11Q06124 597 aaPredicted RBP6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 INPP5AQ14642 412 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 TAF11Q15544 211 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 CLPPQ16740 277 aaPredicted RBP6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 LONRF1Q17RB8 773 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 NAIF1Q69YI7 327 aaPredicted RBP6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 LRFN4Q6PJG9 635 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 C1QL4Q86Z23 238 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 UHMK1Q8TAS1 419 aaKnown RBP6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 SH3TC2Q8TF17 1288 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 HSPA12BQ96MM6 686 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 SCLT1Q96NL6 688 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 SETDB2Q96T68 719 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 NRDE2Q9H7Z3 1164 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 CARS2Q9HA77 564 aaKnown RBP6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 CD248Q9HCU0 757 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 ATP13A1Q9HD20 1204 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 PICK1Q9NRD5 415 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 CHMP5Q9NZZ3 219 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 SEPT10Q9P0V9 454 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 BIN2Q9UBW5 565 aaPredicted RBP6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 ASAP1Q9ULH1 1129 aa6.65□□□□□ -1.34
LSM1P2-201ENST00000604911 EVC2Q86UK5 1308 aa6.65□□□□□ -1.35
LSM1P2-201ENST00000604911 SCAPERQ9BY12 1400 aa6.65□□□□□ -1.35
LSM1P2-201ENST00000604911 BOLA2-SMG1P6H3BVE0 249 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 CELA3AP09093 270 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 ZNF16P17020 682 aaPredicted RBP6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 IL4RP24394 825 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 CHMLP26374 656 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 ZBTB17Q13105 803 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 UBE4AQ14139 1066 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 SLMAPQ14BN4 828 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 SLC4A8Q2Y0W8 1093 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 PCNX4Q63HM2 1172 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 CPLX2Q6PUV4 134 aaKnown RBP6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 RSPH3Q86UC2 560 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 ANKRD18AQ8IVF6 992 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 GOLGA5Q8TBA6 731 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 ZNF483Q8TF39 744 aaPredicted RBP6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 TEKT4Q8WW24 435 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 THOC1Q96FV9 657 aaKnown RBP6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 NAP1L3Q99457 506 aaPredicted RBP6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 PANK2Q9BZ23 570 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 HOMER3Q9NSC5 361 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 TUBA8Q9NY65 449 aaPredicted RBP6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 IP6K2Q9UHH9 426 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 POLG2Q9UHN1 485 aa6.64□□□□□ -1.35
LSM1P2-201ENST00000604911 DDX41Q9UJV9 622 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms