RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 PLEKHH3Q7Z736 793 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 SLFN12Q8IYM2 578 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 C4orf32Q8N8J7 132 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 FAM133AQ8N9E0 248 aa21.05■□□□□ 0.96
SSBP4-212ENST00000601919 ZNF579Q8NAF0 562 aaKnown RBP21.05■□□□□ 0.96
SSBP4-212ENST00000601919 LCTP09848 1927 aa21.04■□□□□ 0.96
SSBP4-212ENST00000601919 EDIL3O43854 480 aa21.04■□□□□ 0.96
SSBP4-212ENST00000601919 UBXN2AP68543 259 aa21.04■□□□□ 0.96
SSBP4-212ENST00000601919 TMEM266Q2M3C6 531 aa21.04■□□□□ 0.96
SSBP4-212ENST00000601919 PRR16Q569H4 304 aa21.04■□□□□ 0.96
SSBP4-212ENST00000601919 POTEDQ86YR6 584 aa21.04■□□□□ 0.96
SSBP4-212ENST00000601919 RAB34Q9BZG1 259 aa21.04■□□□□ 0.96
SSBP4-212ENST00000601919 SLC5A4Q9NY91 659 aa21.04■□□□□ 0.96
SSBP4-212ENST00000601919 FBXO2Q9UK22 296 aaPredicted RBP21.04■□□□□ 0.96
SSBP4-212ENST00000601919 DNAJC25-GNG10A0A024R161 153 aa21.03■□□□□ 0.96
SSBP4-212ENST00000601919 SLC15A5A6NIM6 579 aa21.03■□□□□ 0.96
SSBP4-212ENST00000601919 SLC37A4O43826 429 aa21.03■□□□□ 0.96
SSBP4-212ENST00000601919 NR3C2P08235 984 aa21.03■□□□□ 0.96
SSBP4-212ENST00000601919 MYCLP12524 364 aaPredicted RBP21.03■□□□□ 0.96
SSBP4-212ENST00000601919 GPR142Q7Z601 462 aa21.03■□□□□ 0.96
SSBP4-212ENST00000601919 VSIG10LQ86VR7 867 aa21.03■□□□□ 0.96
SSBP4-212ENST00000601919 FAM20AQ96MK3 541 aa21.03■□□□□ 0.96
SSBP4-212ENST00000601919 MXRA8Q9BRK3 442 aa21.03■□□□□ 0.96
SSBP4-212ENST00000601919 TMEM60Q9H2L4 133 aa21.03■□□□□ 0.96
SSBP4-212ENST00000601919 DDX49Q9Y6V7 483 aaKnown RBP21.03■□□□□ 0.96
SSBP4-212ENST00000601919 ZNF236Q9UL36 1845 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 FAM86B1E9PN63 330 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 GADD45BO75293 160 aaPredicted RBP21.02■□□□□ 0.96
SSBP4-212ENST00000601919 FAM86B2P0C5J1 330 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 CMA1P23946 247 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 LONP1P36776 959 aaKnown RBP21.02■□□□□ 0.96
SSBP4-212ENST00000601919 ALDH5A1P51649 535 aaPredicted RBP21.02■□□□□ 0.96
SSBP4-212ENST00000601919 CNTN2Q02246 1040 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 STXBP2Q15833 593 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 AXDND1Q5T1B0 1012 aaPredicted RBP21.02■□□□□ 0.96
SSBP4-212ENST00000601919 NLRX1Q86UT6 975 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 PLA2G4DQ86XP0 818 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 MRPS27Q92552 414 aaKnown RBP21.02■□□□□ 0.96
SSBP4-212ENST00000601919 MTMR9Q96QG7 549 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 CFHR5Q9BXR6 569 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 THSD7BQ9C0I4 1608 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 PLXNA1Q9UIW2 1896 aa21.02■□□□□ 0.96
SSBP4-212ENST00000601919 VWA3AA6NCI4 1184 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 MEIS1O00470 390 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 ADORA2AP29274 412 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 GRB14Q14449 540 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 CCDC73Q6ZRK6 1079 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 IL31RAQ8NI17 732 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 CDHR1Q96JP9 859 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 AK8Q96MA6 479 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 PURBQ96QR8 312 aaKnown RBP21.01■□□□□ 0.95
SSBP4-212ENST00000601919 KCNMB3Q9NPA1 279 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 JADE2Q9NQC1 790 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 FAM13BQ9NYF5 915 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 UBIAD1Q9Y5Z9 338 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 MRVI1Q9Y6F6 885 aa21.01■□□□□ 0.95
SSBP4-212ENST00000601919 IGLV3-22A0A075B6J6 115 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 ASB14A6NK59 587 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 MAFGO15525 162 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 EIF3JO75822 258 aaKnown RBP21■□□□□ 0.95
SSBP4-212ENST00000601919 PGK2P07205 417 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 TXKP42681 527 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 MRPS9P82933 396 aaKnown RBP21■□□□□ 0.95
SSBP4-212ENST00000601919 PDE4DQ08499 809 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 GNPTABQ3T906 1256 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 DPP9Q86TI2 863 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 FSIP1Q8NA03 581 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 LENG9Q96B70 501 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 CLIC6Q96NY7 704 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 R3HDMLQ9H3Y0 253 aa21■□□□□ 0.95
SSBP4-212ENST00000601919 DIS3Q9Y2L1 958 aaKnown RBP21■□□□□ 0.95
SSBP4-212ENST00000601919 MGAMO43451 1857 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 SOWAHBA6NEL2 793 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 HSPA6P17066 643 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 TXLNAP40222 546 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 FXR2P51116 673 aaKnown RBP eCLIP20.99■□□□□ 0.95
SSBP4-212ENST00000601919 MTMR1Q13613 665 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 PDIA5Q14554 519 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 TPRNQ4KMQ1 711 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 RESP18Q5W5W9 173 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 ZNF467Q7Z7K2 595 aaPredicted RBP20.99■□□□□ 0.95
SSBP4-212ENST00000601919 CYP2W1Q8TAV3 490 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 ETNPPLQ8TBG4 499 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 GPRASP2Q96D09 838 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 CSRNP2Q9H175 543 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 TTC12Q9H892 705 aaPredicted RBP20.99■□□□□ 0.95
SSBP4-212ENST00000601919 PCDHA12Q9UN75 941 aa20.99■□□□□ 0.95
SSBP4-212ENST00000601919 TRAK2O60296 914 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 ITGB5P18084 799 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 EDNRBP24530 442 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 FCGRTP55899 365 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 HTRA3P83110 453 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 KIF22Q14807 665 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 KLHL40Q2TBA0 621 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 ZNF792Q3KQV3 632 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 SOCS4Q8WXH5 440 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 HAS1Q92839 578 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 ZNF577Q9BSK1 485 aa20.98■□□□□ 0.95
SSBP4-212ENST00000601919 TNPO2O14787 897 aaKnown RBP20.97■□□□□ 0.95
SSBP4-212ENST00000601919 MSH4O15457 936 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms