RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 PCDHA6Q9UN73 950 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 PCDHA8Q9Y5H6 950 aa11.89□□□□□ -0.51
CCDC47-203ENST00000580986 ASTN1O14525 1302 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 ASB14A6NK59 587 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 BTBD18B2RXH4 712 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 COBLO75128 1261 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 CYP3A4P08684 503 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 HOXA13P31271 388 aaPredicted RBP11.88□□□□□ -0.51
CCDC47-203ENST00000580986 TRAPPC10P48553 1259 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 USP11P51784 963 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 ORC2Q13416 577 aaPredicted RBP11.88□□□□□ -0.51
CCDC47-203ENST00000580986 UBE2SQ16763 222 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 PCNX4Q63HM2 1172 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 MOXD1Q6UVY6 613 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 DPP9Q86TI2 863 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 NOSTRINQ8IVI9 506 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 MAML3Q96JK9 1138 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 PDCD2LQ9BRP1 358 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 ANO3Q9BYT9 981 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 ZSCAN16Q9H4T2 348 aaPredicted RBP11.88□□□□□ -0.51
CCDC47-203ENST00000580986 PRDM10Q9NQV6 1147 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 MTMR6Q9Y217 621 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 BOLA1Q9Y3E2 137 aa11.88□□□□□ -0.51
CCDC47-203ENST00000580986 CCDC194A0A1B0GVG4 234 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 SOWAHBA6NEL2 793 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 DTNBO60941 627 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 CIITAP33076 1130 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 FLT3LGP49771 235 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 NUCB2P80303 420 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 CAP1Q01518 475 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 PRKCZQ05513 592 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 NONOQ15233 471 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC47-203ENST00000580986 PKN2Q16513 984 aaKnown RBP11.87□□□□□ -0.51
CCDC47-203ENST00000580986 OTOP1Q7RTM1 612 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 NIPA1Q7RTP0 329 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 TAAR1Q96RJ0 339 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 NAP1L4Q99733 375 aaKnown RBP11.87□□□□□ -0.51
CCDC47-203ENST00000580986 BIN2Q9UBW5 565 aaPredicted RBP11.87□□□□□ -0.51
CCDC47-203ENST00000580986 MYH7BA7E2Y1 1941 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 HTTP42858 3142 aa11.87□□□□□ -0.51
CCDC47-203ENST00000580986 CYP3A7-CYP3A51PA0A087WV96 503 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 FAM205CA6NFA0 338 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 MAFGO15525 162 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 BRD1O95696 1058 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 PGK2P07205 417 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 GCFC2P16383 781 aaKnown RBP11.86□□□□□ -0.51
CCDC47-203ENST00000580986 CYP3A7P24462 503 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 CCND2P30279 289 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 ARHGAP4P98171 946 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 GUCY1B3Q02153 619 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 NR5A1Q13285 461 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 PGM5Q15124 567 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 ARHGEF16Q5VV41 709 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 PPP4R3AQ6IN85 833 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 CTU1Q7Z7A3 348 aaKnown RBP11.86□□□□□ -0.51
CCDC47-203ENST00000580986 VSIG10LQ86VR7 867 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 FCHSD1Q86WN1 690 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 NPLOC4Q8TAT6 608 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 OXER1Q8TDS5 423 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 TINF2Q9BSI4 451 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 TSKSQ9UJT2 592 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 GABRQQ9UN88 632 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 KIAA1217Q5T5P2 1943 aa11.86□□□□□ -0.51
CCDC47-203ENST00000580986 VPS37CA5D8V6 355 aaPredicted RBP11.85□□□□□ -0.51
CCDC47-203ENST00000580986 ADAMTS3O15072 1205 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 EIF3JO75822 258 aaKnown RBP11.85□□□□□ -0.51
CCDC47-203ENST00000580986 NR3C2P08235 984 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 ZSCAN22P10073 491 aaPredicted RBP11.85□□□□□ -0.51
CCDC47-203ENST00000580986 RESTQ13127 1097 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
CCDC47-203ENST00000580986 STXBP2Q15833 593 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 RILPL1Q5EBL4 403 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 JAKMIP3Q5VZ66 844 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 NEK8Q86SG6 692 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 RASGRP4Q8TDF6 673 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 TBCKQ8TEA7 893 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 MBOAT7Q96N66 472 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 INPP4AQ96PE3 977 aaPredicted RBP11.85□□□□□ -0.51
CCDC47-203ENST00000580986 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 ABHD16BQ9H3Z7 469 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 VTA1Q9NP79 307 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 TMEM260Q9NX78 707 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 MYH15Q9Y2K3 1946 aa11.85□□□□□ -0.51
CCDC47-203ENST00000580986 KIF28PB7ZC32 967 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 HMGCRP04035 888 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 TGFB3P10600 412 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 EIF2AK2P19525 551 aaKnown RBP11.84□□□□□ -0.51
CCDC47-203ENST00000580986 CYP2B6P20813 491 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 LBX1P52954 281 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 SETQ01105 290 aaPredicted RBP11.84□□□□□ -0.51
CCDC47-203ENST00000580986 GNPTABQ3T906 1256 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 ATL3Q6DD88 541 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 KCNV1Q6PIU1 500 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 PIK3AP1Q6ZUJ8 805 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 ARMCX2Q7L311 632 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 GPRASP2Q96D09 838 aa11.84□□□□□ -0.51
CCDC47-203ENST00000580986 CDHR1Q96JP9 859 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms