RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 IDEP14735 1019 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 SNAP25P60880 206 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 JAG1P78504 1218 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 KLRC3Q07444 240 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 SLC35F6Q8N357 371 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 GLIS3Q8NEA6 775 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 EPC1Q9H2F5 836 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 MEIS2O14770 477 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 ABCB5Q2M3G0 1257 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 RSRC2Q7L4I2 434 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 GUF1Q8N442 669 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 P2RX7Q99572 595 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 ANO3Q9BYT9 981 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 GLT8D2Q9H1C3 349 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 SMCHD1A6NHR9 2005 aa20.66■□□□□ 0.9
PRPF40B-208ENST00000548436 TRIM21P19474 475 aaKnown RBP20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 HYIQ5T013 277 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 DNAJC19Q96DA6 116 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 PRDM10Q9NQV6 1147 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 USP11P51784 963 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 RRP1BQ14684 758 aaKnown RBP20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 MEA1Q16626 185 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 SMAP1Q8IYB5 467 aaPredicted RBP20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 CNKSR1Q969H4 720 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 PRMT6Q96LA8 375 aaPredicted RBP20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 ERGIC2Q96RQ1 377 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 NAP1L4Q99733 375 aaKnown RBP20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 NUP58Q9BVL2 599 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 LRRC27Q9C0I9 530 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 KCNMB3Q9NPA1 279 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 FAM53CQ9NYF3 392 aa20.65■□□□□ 0.9
PRPF40B-208ENST00000548436 CYP3A7-CYP3A51PA0A087WV96 503 aa20.64■□□□□ 0.89
PRPF40B-208ENST00000548436 YDJCA8MPS7 323 aa20.64■□□□□ 0.89
PRPF40B-208ENST00000548436 NDUFB10O96000 172 aa20.64■□□□□ 0.89
PRPF40B-208ENST00000548436 CYP3A7P24462 503 aa20.64■□□□□ 0.89
PRPF40B-208ENST00000548436 LRRC41Q15345 812 aa20.64■□□□□ 0.89
PRPF40B-208ENST00000548436 RETREG2Q8NC44 543 aa20.64■□□□□ 0.89
PRPF40B-208ENST00000548436 GMCL1P1Q8NEA9 526 aa20.64■□□□□ 0.89
PRPF40B-208ENST00000548436 ATRNL1Q5VV63 1379 aa20.64■□□□□ 0.89
PRPF40B-208ENST00000548436 PSMD2Q13200 908 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 TSR1Q2NL82 804 aaKnown RBP20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 CRYGNQ8WXF5 182 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 MBOAT7Q96N66 472 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 TRIM10Q9UDY6 481 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 CDC23Q9UJX2 597 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 CTAGE9A4FU28 777 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 E9PMD0 336 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 GH2P01242 217 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 COASYQ13057 564 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 TEX35Q5T0J7 233 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 GMCL1Q96IK5 515 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 PSME4Q14997 1843 aa20.63■□□□□ 0.89
PRPF40B-208ENST00000548436 KDM3AQ9Y4C1 1321 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 ENTPD3O75355 529 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 HERVK_113P62684 666 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 ZBED6P86452 979 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 KIF4BQ2VIQ3 1234 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 PCMTD1Q96MG8 357 aaPredicted RBP20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 AMNQ9BXJ7 453 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 KIAA1024Q9UPX6 916 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 POTEB3A0JP26 581 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 POTECB2RU33 542 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 TAL1P17542 331 aaPredicted RBP20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 STAT3P40763 770 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 LRRC63Q05C16 580 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 USH1GQ495M9 461 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 VWA3BQ502W6 1294 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 FKBP15Q5T1M5 1219 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 POTEBQ6S5H4 581 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 LRRC55Q6ZSA7 311 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 GPR161Q8N6U8 529 aaKnown RBP20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 NT5C3AQ9H0P0 336 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 MYO1AQ9UBC5 1043 aa20.62■□□□□ 0.89
PRPF40B-208ENST00000548436 SSBP05455 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 ZSCAN20P17040 1043 aaPredicted RBP20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 ARHGAP4P98171 946 aa20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 AP3B2Q13367 1082 aa20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 FIGNQ5HY92 759 aa20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 SYDE2Q5VT97 1194 aa20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 FBXO11Q86XK2 927 aa20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 NDST4Q9H3R1 872 aa20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 ZSWIM4Q9H7M6 989 aa20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 PANK4Q9NVE7 773 aa20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 TFR2Q9UP52 801 aa20.61■□□□□ 0.89
PRPF40B-208ENST00000548436 A0A1W2PQJ5 194 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 A0A1W2PRG0 241 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 RBM26Q5T8P6 1007 aaKnown RBP20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 SRGAP1Q7Z6B7 1085 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 GOLGA1Q92805 767 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 CSRNP1Q96S65 589 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 NAPGQ99747 312 aaPredicted RBP20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 FGFBP2Q9BYJ0 223 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 ARGLU1Q9NWB6 273 aaPredicted RBP20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 GUCA1BQ9UMX6 200 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 SIK3Q9Y2K2 1263 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 RGPD3A6NKT7 1758 aaPredicted RBP20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 RGPD4Q7Z3J3 1758 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 PPIP5K2O43314 1243 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 MED24O75448 989 aa20.6■□□□□ 0.89
PRPF40B-208ENST00000548436 TFRCP02786 760 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms