RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 PTGS1P23219 599 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 SETQ01105 290 aaPredicted RBP13.76□□□□□ -0.21
CHD7-211ENST00000532149 CDKAL1Q5VV42 579 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 UNC13DQ70J99 1090 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 ADSSL1Q8N142 457 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 GPC2Q8N158 579 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 LARP4BQ92615 738 aaKnown RBP13.76□□□□□ -0.21
CHD7-211ENST00000532149 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 TRIM9Q9C026 710 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 LIMA1Q9UHB6 759 aaKnown RBP13.76□□□□□ -0.21
CHD7-211ENST00000532149 CNOT7Q9UIV1 285 aaKnown RBP13.76□□□□□ -0.21
CHD7-211ENST00000532149 BCS1LQ9Y276 419 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHD7-211ENST00000532149 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 PSDA5PKW4 1024 aaPredicted RBP13.75□□□□□ -0.21
CHD7-211ENST00000532149 FAM196BA6NMK8 535 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 PHF20L1A8MW92 1017 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 C19orf81C9J6K1 198 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 NR1I3Q14994 352 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 SUPT20HL1Q3ZLR7 823 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 TMEM119Q4V9L6 283 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 XRRA1Q6P2D8 792 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 NIPA1Q7RTP0 329 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 CLEC10AQ8IUN9 316 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 TMEM39BQ9GZU3 492 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 MAGEC2Q9UBF1 373 aaPredicted RBP13.75□□□□□ -0.21
CHD7-211ENST00000532149 ZNF112Q9UJU3 913 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 COL4A5P29400 1685 aa13.75□□□□□ -0.21
CHD7-211ENST00000532149 STX10O60499 249 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 ICAM1P05362 532 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 SKILP12757 684 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 LMNB1P20700 586 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 PTGER2P43116 358 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 GMPSP49915 693 aaPredicted RBP13.74□□□□□ -0.21
CHD7-211ENST00000532149 OAZ1P54368 228 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 NBPF9Q3BBW0 867 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 DNTTIP2Q5QJE6 756 aaKnown RBP13.74□□□□□ -0.21
CHD7-211ENST00000532149 ISM2Q6H9L7 571 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 TMC6Q7Z403 805 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 FILIP1Q7Z7B0 1213 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 MICALL2Q8IY33 904 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 NEK9Q8TD19 979 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 RAD54LQ92698 747 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 FEZ1Q99689 392 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 WDR11Q9BZH6 1224 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 PAXBP1Q9Y5B6 917 aa13.74□□□□□ -0.21
CHD7-211ENST00000532149 MYH7BA7E2Y1 1941 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 DICER1Q9UPY3 1922 aaKnown RBP13.73□□□□□ -0.21
CHD7-211ENST00000532149 ADAMTS3O15072 1205 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 ZSCAN12O43309 604 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 KLRC4O43908 158 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 TDP2O95551 362 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 BCRP11274 1271 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 CCNE1P24864 410 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 RPA1P27694 616 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 ZNF76P36508 570 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 LRRC63Q05C16 580 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 UBE2SQ16763 222 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 KIF4BQ2VIQ3 1234 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 KMT5BQ4FZB7 885 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 ARHGAP27Q6ZUM4 889 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 RASGRP2Q7LDG7 609 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 CCDC65Q8IXS2 484 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 GRAMD1CQ8IYS0 662 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 GUF1Q8N442 669 aaKnown RBP13.73□□□□□ -0.21
CHD7-211ENST00000532149 RETREG2Q8NC44 543 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 CACTINQ8WUQ7 758 aaKnown RBP13.73□□□□□ -0.21
CHD7-211ENST00000532149 NELFBQ8WX92 580 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 HAS1Q92839 578 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 TEPSINQ96N21 525 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 MTRQ99707 1265 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 SLF1Q9BQI6 1058 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 MMTAG2Q9BU76 263 aaKnown RBP13.73□□□□□ -0.21
CHD7-211ENST00000532149 POLR3CQ9BUI4 534 aaPredicted RBP13.73□□□□□ -0.21
CHD7-211ENST00000532149 KCNF1Q9H3M0 494 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 SPON1Q9HCB6 807 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 KCND2Q9NZV8 630 aa13.73□□□□□ -0.21
CHD7-211ENST00000532149 CTDP1Q9Y5B0 961 aaPredicted RBP13.73□□□□□ -0.21
CHD7-211ENST00000532149 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 A0A1W2PQC6 194 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L15C9J2P7 530 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L13C9JLJ4 530 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L11C9JVI0 530 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L18D6R9N7 530 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L22D6RA61 530 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L17D6RBQ6 530 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L19D6RCP7 530 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L20D6RJB6 530 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 ARHGAP6O43182 974 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 SLC37A4O43826 429 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 ZBED4O75132 1171 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 ASIC1P78348 528 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 FMR1Q06787 632 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHD7-211ENST00000532149 USP17L24Q0WX57 530 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 GRB10Q13322 594 aa13.72□□□□□ -0.21
CHD7-211ENST00000532149 R3HDM1Q15032 1099 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms