RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 COPB1P53618 953 aaKnown RBP12.88□□□□□ -0.35
USP35-207ENST00000530546 TMEM266Q2M3C6 531 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 ABCB5Q2M3G0 1257 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 ANKRD20A12PQ8NF67 263 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 C7orf43Q8WVR3 580 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 EXOC1Q9NV70 894 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 PPP2R2CQ9Y2T4 447 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 PCDHA1Q9Y5I3 950 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 SCN9AQ15858 1988 aa12.88□□□□□ -0.35
USP35-207ENST00000530546 GH2P01242 217 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 FCER1AP12319 257 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 CASP14P31944 242 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 JAG1P78504 1218 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 STIM1Q13586 685 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 MCM6Q14566 821 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 TCP11X2Q5H9J9 407 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 DYMQ7RTS9 669 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 GPATCH11Q8N954 259 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 NUDT12Q9BQG2 462 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 TRIM9Q9C026 710 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 SOWAHDA6NJG2 315 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 ERLIN1O75477 346 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
USP35-207ENST00000530546 USH1GQ495M9 461 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 SIAH1Q8IUQ4 282 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 SPICE1Q8N0Z3 855 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 SNX29Q8TEQ0 813 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 CCDC47Q96A33 483 aaKnown RBP12.87□□□□□ -0.35
USP35-207ENST00000530546 CSRNP1Q96S65 589 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 EPC1Q9H2F5 836 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 DONSONQ9NYP3 566 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 DDX25Q9UHL0 483 aaKnown RBP12.87□□□□□ -0.35
USP35-207ENST00000530546 KCNG1Q9UIX4 513 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 MYH8P13535 1937 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 F5H6K3 240 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 PSMA7O14818 248 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 HDLBPQ00341 1268 aaKnown RBP12.87□□□□□ -0.35
USP35-207ENST00000530546 KLRC3Q07444 240 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 STK4Q13043 487 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 GRB10Q13322 594 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 KCNB1Q14721 858 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
USP35-207ENST00000530546 LIMA1Q9UHB6 759 aaKnown RBP12.87□□□□□ -0.35
USP35-207ENST00000530546 QSER1Q2KHR3 1735 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 A0A087WUV0 522 aaPredicted RBP12.86□□□□□ -0.35
USP35-207ENST00000530546 STX10O60499 249 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 RHOBTB3O94955 611 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
USP35-207ENST00000530546 GIMAP8Q8ND71 665 aaPredicted RBP12.86□□□□□ -0.35
USP35-207ENST00000530546 FAM71BQ8TC56 605 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 PNMA5Q96PV4 448 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 MRIQ9BWK5 157 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 CXorf56Q9H5V9 222 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
USP35-207ENST00000530546 NYAP2Q9P242 653 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
USP35-207ENST00000530546 PBX1P40424 430 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 FKBP1AP62942 108 aaKnown RBP12.86□□□□□ -0.35
USP35-207ENST00000530546 UBXN1Q04323 297 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 SPAG1Q07617 926 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 RRP1BQ14684 758 aaKnown RBP12.86□□□□□ -0.35
USP35-207ENST00000530546 BEND6Q5SZJ8 279 aaPredicted RBP12.86□□□□□ -0.35
USP35-207ENST00000530546 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 TMEM179Q6ZVK1 233 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 TADA2BQ86TJ2 420 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 CUEDC2Q9H467 287 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 SLC39A2Q9NP94 309 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 RAB21Q9UL25 225 aa12.86□□□□□ -0.35
USP35-207ENST00000530546 H7C1D1 291 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 NDUFB10O96000 172 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 SSBP05455 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP35-207ENST00000530546 IDEP14735 1019 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 RBM26Q5T8P6 1007 aaKnown RBP12.85□□□□□ -0.35
USP35-207ENST00000530546 KRT79Q5XKE5 535 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 IRF2BP1Q8IU81 584 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 GYPCP04921 128 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 GNG11P61952 73 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 AMPD3Q01432 767 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 CC2D2BQ6DHV5 1058 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 TATDN1Q6P1N9 297 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 DCAF4Q8WV16 495 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 C7orf25Q9BPX7 421 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 ACBD3Q9H3P7 528 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 BLOC1S4Q9NUP1 217 aa12.85□□□□□ -0.35
USP35-207ENST00000530546 MAGEC2Q9UBF1 373 aaPredicted RBP12.85□□□□□ -0.35
USP35-207ENST00000530546 MYMKA6NI61 221 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 RNF225M0QZC1 329 aaPredicted RBP12.84□□□□□ -0.35
USP35-207ENST00000530546 MFAP3LO75121 409 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 MYL1P05976 194 aa12.84□□□□□ -0.35
USP35-207ENST00000530546 CLK2P49760 499 aaKnown RBP12.84□□□□□ -0.35
USP35-207ENST00000530546 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms