RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 CNBD1Q8NA66 436 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 DDX12PQ92771 950 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 RAB34Q9BZG1 259 aa21.61■■□□□ 1.05
PCF11-203ENST00000530304 ZC3H4Q9UPT8 1303 aaKnown RBP21.61■■□□□ 1.05
PCF11-203ENST00000530304 MOCS3O95396 460 aa21.6■■□□□ 1.05
PCF11-203ENST00000530304 ERCC3P19447 782 aa21.6■■□□□ 1.05
PCF11-203ENST00000530304 SNX29Q8TEQ0 813 aa21.6■■□□□ 1.05
PCF11-203ENST00000530304 AKR1B10O60218 316 aa21.6■■□□□ 1.05
PCF11-203ENST00000530304 IL1R1P14778 569 aa21.6■■□□□ 1.05
PCF11-203ENST00000530304 MFSD14BQ5SR56 506 aa21.6■■□□□ 1.05
PCF11-203ENST00000530304 KCNK18Q7Z418 384 aa21.6■■□□□ 1.05
PCF11-203ENST00000530304 GPIHBP1Q8IV16 184 aa21.6■■□□□ 1.05
PCF11-203ENST00000530304 DRC1Q96MC2 740 aa21.6■■□□□ 1.05
PCF11-203ENST00000530304 PRPF6O94906 941 aaKnown RBP21.59■■□□□ 1.05
PCF11-203ENST00000530304 LRRC41Q15345 812 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 KRT79Q5XKE5 535 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 LRRC55Q6ZSA7 311 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 GLIS3Q8NEA6 775 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 FAM163AQ96GL9 167 aaPredicted RBP21.59■■□□□ 1.05
PCF11-203ENST00000530304 SELENOOQ9BVL4 669 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 MTMR4Q9NYA4 1195 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 RPS6KA5O75582 802 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 PRLRP16471 622 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 ATP2B2Q01814 1243 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 LRRC47Q8N1G4 583 aaKnown RBP21.59■■□□□ 1.05
PCF11-203ENST00000530304 BAP1Q92560 729 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 EHHADHQ08426 723 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 TRAPPC3LQ5T215 181 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 MMGT1Q8N4V1 131 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 HINFPQ9BQA5 517 aa21.59■■□□□ 1.05
PCF11-203ENST00000530304 PSMD2Q13200 908 aa21.58■■□□□ 1.05
PCF11-203ENST00000530304 ECM1Q16610 540 aa21.58■■□□□ 1.05
PCF11-203ENST00000530304 RIN2Q8WYP3 895 aaPredicted RBP21.58■■□□□ 1.05
PCF11-203ENST00000530304 RPGRQ92834 1020 aaKnown RBP21.58■■□□□ 1.05
PCF11-203ENST00000530304 IVLP07476 585 aa21.58■■□□□ 1.04
PCF11-203ENST00000530304 ASPRV1Q53RT3 343 aa21.58■■□□□ 1.04
PCF11-203ENST00000530304 CCDC70Q6NSX1 233 aa21.58■■□□□ 1.04
PCF11-203ENST00000530304 ZNF572Q7Z3I7 529 aaPredicted RBP21.58■■□□□ 1.04
PCF11-203ENST00000530304 CCDC155Q8N6L0 562 aa21.58■■□□□ 1.04
PCF11-203ENST00000530304 OSBPL9Q96SU4 736 aa21.58■■□□□ 1.04
PCF11-203ENST00000530304 BTAF1O14981 1849 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 ATP2B4P23634 1241 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 GGCXP38435 758 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 TNNI2P48788 182 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 EIF6P56537 245 aaKnown RBP21.57■■□□□ 1.04
PCF11-203ENST00000530304 TMEM119Q4V9L6 283 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 SLF2Q8IX21 1173 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 GOLGA6L1Q8N7Z2 621 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 SPATA4Q8NEY3 305 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 CRACR2AQ9BSW2 395 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 LRRC27Q9C0I9 530 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 GPCPD1Q9NPB8 672 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 RIC8AQ9NPQ8 531 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 GGA1Q9UJY5 639 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 MYH10P35580 1976 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 MAGEA1P43355 309 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 NFRKBQ6P4R8 1299 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 AFAP1L1Q8TED9 768 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 HDAC7Q8WUI4 952 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 ALS2CR12Q96Q35 445 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 TSG101Q99816 390 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 LRRC1Q9BTT6 524 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 LCMT1Q9UIC8 334 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 SALL4Q9UJQ4 1053 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 GAKO14976 1311 aa21.57■■□□□ 1.04
PCF11-203ENST00000530304 ITIH3Q06033 890 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 KCNMA1Q12791 1236 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 EZH2Q15910 746 aaKnown RBP21.56■■□□□ 1.04
PCF11-203ENST00000530304 ASTE1Q2TB18 679 aaPredicted RBP21.56■■□□□ 1.04
PCF11-203ENST00000530304 CACNA2D4Q7Z3S7 1137 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 TANGO6Q9C0B7 1094 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 AGPSO00116 658 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 SNHG28P0DPA3 235 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 CXCR5P32302 372 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 GFPT1Q06210 699 aaPredicted RBP21.56■■□□□ 1.04
PCF11-203ENST00000530304 UBE2SQ16763 222 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 FAM182BQ5T319 152 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 PPP4R3AQ6IN85 833 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 PDXDC1Q6P996 788 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 AENQ8WTP8 325 aaKnown RBP21.56■■□□□ 1.04
PCF11-203ENST00000530304 PSMB7Q99436 277 aa21.56■■□□□ 1.04
PCF11-203ENST00000530304 PJA2O43164 708 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 TCP1P17987 556 aaKnown RBP21.55■■□□□ 1.04
PCF11-203ENST00000530304 PICALMQ13492 652 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 PRR5LQ6MZQ0 368 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 FOXR1Q6PIV2 292 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 CLEC10AQ8IUN9 316 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 MYOCDQ8IZQ8 938 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 ANKRD13CQ8N6S4 541 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 DNAJC19Q96DA6 116 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 FAM184BQ9ULE4 1060 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 HYOU1Q9Y4L1 999 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 PLIN4Q96Q06 1357 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 AKR1B1P15121 316 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 HOXA7P31268 230 aaPredicted RBP21.55■■□□□ 1.04
PCF11-203ENST00000530304 LRRC31Q6UY01 552 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 PROM2Q8N271 834 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 HAS1Q92839 578 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 GJA10Q969M2 543 aa21.55■■□□□ 1.04
PCF11-203ENST00000530304 JMJD4Q9H9V9 463 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms