RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 GNAT1P11488 350 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 HSP90B1P14625 803 aaKnown RBP5.47□□□□□ -1.53
SKP1-212ENST00000523966 NR0B2Q15466 257 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 CRY1Q16526 586 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 ZNF792Q3KQV3 632 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 PIK3R6Q5UE93 754 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 MBLAC2Q68D91 279 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 CDCA2Q69YH5 1023 aaPredicted RBP5.47□□□□□ -1.53
SKP1-212ENST00000523966 BICRALQ6AI39 1079 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 ZCCHC8Q6NZY4 707 aaKnown RBP5.47□□□□□ -1.53
SKP1-212ENST00000523966 TEX2Q8IWB9 1127 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 ABHD4Q8TB40 342 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 TARS2Q9BW92 718 aaKnown RBP5.47□□□□□ -1.53
SKP1-212ENST00000523966 BRINP2Q9C0B6 783 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 EPB41L1Q9H4G0 881 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 IPPKQ9H8X2 491 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 MBNL3Q9NUK0 354 aaKnown RBP5.47□□□□□ -1.53
SKP1-212ENST00000523966 SAMD15Q9P1V8 674 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 ADGRE2Q9UHX3 823 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 ZKSCAN5Q9Y2L8 839 aa5.47□□□□□ -1.53
SKP1-212ENST00000523966 NOP58Q9Y2X3 529 aaKnown RBP5.47□□□□□ -1.53
SKP1-212ENST00000523966 A0A087X0B3 334 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 KRIT1O00522 736 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 MAFKO60675 156 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 HPXP02790 462 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 RNASE1P07998 156 aaKnown RBP5.46□□□□□ -1.54
SKP1-212ENST00000523966 TACR1P25103 407 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 STAT3P40763 770 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 SCNN1BP51168 640 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 NFKB2Q00653 900 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 ZNF460Q14592 562 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 CHRNA2Q15822 529 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 MROH9Q5TGP6 573 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 C16orf59Q7L2K0 433 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 IGSF22Q8N9C0 903 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 PCDH19Q8TAB3 1148 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 C19orf44Q9H6X5 657 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.46□□□□□ -1.542e-6■■■□□ 18.4
SKP1-212ENST00000523966 PCDH12Q9NPG4 1184 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 EBF1Q9UH73 591 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 MCM8Q9UJA3 840 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 DBR1Q9UK59 544 aaKnown RBP5.46□□□□□ -1.54
SKP1-212ENST00000523966 NUDT5Q9UKK9 219 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 ACSL6Q9UKU0 697 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 CTNND2Q9UQB3 1225 aa5.46□□□□□ -1.54
SKP1-212ENST00000523966 CCDC66A2RUB6 948 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 GSG1L2A8MUP6 293 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 BIN1O00499 593 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 GAS7O60861 476 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 VIL1P09327 827 aaKnown RBP5.45□□□□□ -1.54
SKP1-212ENST00000523966 FPR2P25090 351 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 GP2P55259 537 aaKnown RBP5.45□□□□□ -1.54
SKP1-212ENST00000523966 ERVFC1P60507 584 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 MVKQ03426 396 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 THNSL2Q86YJ6 484 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 WFDC3Q8IUB2 231 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 SIRT2Q8IXJ6 389 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 UBR7Q8N806 425 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 C2orf69Q8N8R5 385 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 OR2W6PQ8NHA6 318 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 ATL2Q8NHH9 583 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 DPF3Q92784 378 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 USP7Q93009 1102 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 JAM3Q9BX67 310 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 AP5M1Q9H0R1 490 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 CRTAC1Q9NQ79 661 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 ADAMTS6Q9UKP5 1117 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 COQ6Q9Y2Z9 468 aa5.45□□□□□ -1.54
SKP1-212ENST00000523966 M0R2C6 588 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 PSPNO60542 156 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 PYGMP11217 842 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 PNLIPP16233 465 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 POU3F2P20265 443 aaPredicted RBP5.44□□□□□ -1.54
SKP1-212ENST00000523966 TRHRP34981 398 aaPredicted RBP5.44□□□□□ -1.54
SKP1-212ENST00000523966 ARHGAP44Q17R89 818 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 ARTNQ5T4W7 220 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 NBPF11Q86T75 865 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 ANKLE2Q86XL3 938 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 RIOX2Q8IUF8 465 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 KIRREL1Q96J84 757 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 CELF4Q9BZC1 486 aaKnown RBP5.44□□□□□ -1.54
SKP1-212ENST00000523966 ZFP64Q9NPA5 681 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 PPARGC1AQ9UBK2 798 aaKnown RBP5.44□□□□□ -1.54
SKP1-212ENST00000523966 X6R8D5 127 aa5.44□□□□□ -1.54
SKP1-212ENST00000523966 ADAMTS4O75173 837 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 NTRK1P04629 796 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 MPOP05164 745 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 KRT15P19012 456 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 TMEM62Q0P6H9 643 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 PCBP1Q15365 356 aaKnown RBP eCLIP5.43□□□□□ -1.54
SKP1-212ENST00000523966 TMEM177Q53S58 311 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 NFXL1Q6ZNB6 911 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 NLRX1Q86UT6 975 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 NLRP10Q86W26 655 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 KIF18BQ86Y91 864 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 DCP2Q8IU60 420 aaKnown RBP5.43□□□□□ -1.54
SKP1-212ENST00000523966 PLEKHO2Q8TD55 490 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 PLCD4Q9BRC7 762 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 MTA3Q9BTC8 594 aa5.43□□□□□ -1.54
SKP1-212ENST00000523966 FBXL7Q9UJT9 491 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms