RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 JAKMIP1Q96N16 626 aaKnown RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 FAM129BQ96TA1 746 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 PARK7Q99497 189 aaKnown RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 P2RX7Q99572 595 aaKnown RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 LRRC2Q9BYS8 371 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TANGO6Q9C0B7 1094 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 R3HDMLQ9H3Y0 253 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 RPAP3Q9H6T3 665 aaPredicted RBP6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 KAT14Q9H8E8 782 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 SNX14Q9Y5W7 946 aa6.78□□□□□ -1.32
SCARNA6.1-201ENST00000516989 TNKSO95271 1327 aa6.77□□□□□ -1.32
SCARNA6.1-201ENST00000516989 WDR46O15213 610 aaKnown RBP6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PRC1O43663 620 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TLR2O60603 784 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FLOT1O75955 427 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 IGHA2P01877 340 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 HMGB1P09429 215 aaKnown RBP6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 BMP3P12645 472 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CPA1P15085 419 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PTGIRP43119 386 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 IKQ13123 557 aaPredicted RBP6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NNTQ13423 1086 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CCDC96Q2M329 555 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FAM83BQ5T0W9 1011 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RCSD1Q6JBY9 416 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 BLOC1S2Q6QNY1 142 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NFXL1Q6ZNB6 911 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 KCTD1Q719H9 257 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TMTC2Q8N394 836 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ENAHQ8N8S7 591 aaPredicted RBP6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GMCL1P1Q8NEA9 526 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ANKS1AQ92625 1134 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TMEM87BQ96K49 555 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TCEANC2Q96MN5 208 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NUP88Q99567 741 aaPredicted RBP6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NIF3L1Q9GZT8 377 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ASCC2Q9H1I8 757 aaPredicted RBP6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 UPF2Q9HAU5 1272 aaKnown RBP6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZCCHC17Q9NP64 241 aaKnown RBP6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SAGE1Q9NXZ1 904 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 HOXC10Q9NYD6 342 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CPA4Q9UI42 421 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 POLIQ9UNA4 740 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SLC45A1Q9Y2W3 748 aa6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CTDP1Q9Y5B0 961 aaPredicted RBP6.77□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FRMPD2Q68DX3 1309 aaPredicted RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 DDX60LQ5H9U9 1706 aaKnown RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CCDC69A6NI79 296 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TMEM232C9JQI7 657 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GPR25O00155 361 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MEN1O00255 615 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GPR182O15218 404 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FOXN1O15353 648 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PRPF40AO75400 957 aaKnown RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GOLGA8HP0CJ92 632 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CASTP20810 708 aaKnown RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NOVP48745 357 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CTCFP49711 727 aaPredicted RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 LBX1P52954 281 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ANTXR2P58335 489 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 EXOSC10Q01780 885 aaKnown RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 DNM1Q05193 864 aaKnown RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SEC23AQ15436 765 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RTN1Q16799 776 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TTBK2Q6IQ55 1244 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 C17orf99Q6UX52 265 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SYNE3Q6ZMZ3 975 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 Q6ZUG5 572 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CATIPQ7Z7H3 387 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CCAR1Q8IX12 1150 aaKnown RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ETFBKMTQ8IXQ9 262 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ANKRD13CQ8N6S4 541 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 IGDCC4Q8TDY8 1250 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CHURC1Q8WUH1 139 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NUP133Q8WUM0 1156 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RNF166Q96A37 237 aaPredicted RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 KIFC2Q96AC6 838 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 AGBL1Q96MI9 1066 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 DUSP9Q99956 384 aaKnown RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SLF1Q9BQI6 1058 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PAGR1Q9BTK6 254 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 C22orf23Q9BZE7 217 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SENP2Q9HC62 589 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FBXO28Q9NVF7 368 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PARP2Q9UGN5 583 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NAP1L2Q9ULW6 460 aaPredicted RBP6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SYNPO2Q9UMS6 1093 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CYP46A1Q9Y6A2 500 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 WASF2Q9Y6W5 498 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PLIN4Q96Q06 1357 aa6.76□□□□□ -1.33
SCARNA6.1-201ENST00000516989 OTOFQ9HC10 1997 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 DOCK1Q14185 1865 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PEX10O60683 326 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FKTNO75072 461 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZBED4O75132 1171 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PARP1P09874 1014 aaKnown RBP6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 HSPA8P11142 646 aaKnown RBP6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PDHBP11177 359 aa6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MZF1P28698 734 aaPredicted RBP6.75□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GCLCP48506 637 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms