RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FBLN5Q9UBX5 448 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 ADGRE2Q9UHX3 823 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 X6R8D5 127 aa6.88□□□□□ -1.31
VPS36-206ENST00000497149 WNT9AO14904 365 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 OPA1O60313 960 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 SRGAP2CP0DJJ0 459 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 PNLIPP16233 465 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 FPR2P25090 351 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 GRK2P25098 689 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 TACR1P25103 407 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 GRK3P35626 688 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 IGFALSP35858 605 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 GALK1P51570 392 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 ZNF460Q14592 562 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 CNNM4Q6P4Q7 775 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 FILIP1Q7Z7B0 1213 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 ZC3H7AQ8IWR0 971 aaKnown RBP6.87□□□□□ -1.31
VPS36-206ENST00000497149 SIRT2Q8IXJ6 389 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 DDX1Q92499 740 aaKnown RBP6.87□□□□□ -1.31
VPS36-206ENST00000497149 IPPKQ9H8X2 491 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 SPC25Q9HBM1 224 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 IFT57Q9NWB7 429 aa6.87□□□□□ -1.31
VPS36-206ENST00000497149 A0A1W2PQJ5 194 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 B4E1Z4 1266 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 FAM47E-STBD1D6RA91 191 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 DNAJC6O75061 913 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 IRAK1P51617 712 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 ABHD17CQ6PCB6 329 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 KIRREL1Q96J84 757 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 TARS2Q9BW92 718 aaKnown RBP6.86□□□□□ -1.31
VPS36-206ENST00000497149 JAM3Q9BX67 310 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 RNF32Q9H0A6 362 aa6.86□□□□□ -1.31
VPS36-206ENST00000497149 FAM83GA6ND36 823 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 PDE8AO60658 829 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 CKMP06732 381 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 POU3F2P20265 443 aaPredicted RBP6.85□□□□□ -1.31
VPS36-206ENST00000497149 FLT3P36888 993 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 ARL4AP40617 200 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 MROH9Q5TGP6 573 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 BICRALQ6AI39 1079 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 ZCCHC8Q6NZY4 707 aaKnown RBP6.85□□□□□ -1.31
VPS36-206ENST00000497149 RIOX2Q8IUF8 465 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 FBXW5Q969U6 566 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 KCNJ15Q99712 375 aa6.85□□□□□ -1.31
VPS36-206ENST00000497149 COA3Q9Y2R0 106 aaPredicted RBP6.85□□□□□ -1.31
VPS36-206ENST00000497149 YBX2Q9Y2T7 364 aaKnown RBP6.85□□□□□ -1.31
VPS36-206ENST00000497149 GSG1L2A8MUP6 293 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 GSTA4O15217 222 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 NTRK1P04629 796 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 VIL1P09327 827 aaKnown RBP6.84□□□□□ -1.31
VPS36-206ENST00000497149 JMJD7P0C870 316 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 GLI4P10075 376 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 TXKP42681 527 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 NEK4P51957 841 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 UBE2R2Q712K3 238 aaPredicted RBP6.84□□□□□ -1.31
VPS36-206ENST00000497149 C16orf59Q7L2K0 433 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 THNSL2Q86YJ6 484 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 EPB41L1Q9H4G0 881 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 MAPRE3Q9UPY8 281 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 COQ6Q9Y2Z9 468 aa6.84□□□□□ -1.31
VPS36-206ENST00000497149 CCDC66A2RUB6 948 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 BIN1O00499 593 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 DGKIO75912 1065 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 NPTXRO95502 500 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 PYGMP11217 842 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 NCLP19338 710 aaKnown RBP6.83□□□□□ -1.32
VPS36-206ENST00000497149 STAT3P40763 770 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 ST5P78524 1137 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 CFAP100Q494V2 611 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 FAM47CQ5HY64 1035 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 CDCA2Q69YH5 1023 aaPredicted RBP6.83□□□□□ -1.32
VPS36-206ENST00000497149 KRT26Q7Z3Y9 468 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 DDX53Q86TM3 631 aaKnown RBP6.83□□□□□ -1.32
VPS36-206ENST00000497149 CABP7Q86V35 215 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 AHI1Q8N157 1196 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 PPM1KQ8N3J5 372 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 IGSF22Q8N9C0 903 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 WNK4Q96J92 1243 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 CELF4Q9BZC1 486 aaKnown RBP6.83□□□□□ -1.32
VPS36-206ENST00000497149 MTFR1LQ9H019 292 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 CAAP1Q9H8G2 361 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 TNFRSF12AQ9NP84 129 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 SAMD15Q9P1V8 674 aa6.83□□□□□ -1.32
VPS36-206ENST00000497149 SRGAP3O43295 1099 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 GNAT1P11488 350 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 DNM2P50570 870 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 ERVFRD-1P60508 538 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 SPIRE1Q08AE8 756 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 PCBP1Q15365 356 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS36-206ENST00000497149 PIK3R6Q5UE93 754 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 WWC2Q6AWC2 1192 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 OTOP3Q7RTS5 596 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 RNF180Q86T96 592 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS36-206ENST00000497149 CHAC2Q8WUX2 184 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 CATSPERZQ9NTU4 200 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 CBLCQ9ULV8 474 aa6.82□□□□□ -1.32
VPS36-206ENST00000497149 GLRX3O76003 335 aaKnown RBP6.81□□□□□ -1.32
VPS36-206ENST00000497149 CYBBP04839 570 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms